RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 ARF5P84085 180 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 PPARDQ03181 441 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 ZFP36L1Q07352 338 aaKnown RBP5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 SLC20A2Q08357 652 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 MORC3Q14149 939 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 ELOCQ15369 112 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 TCEA2Q15560 299 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 ALG11Q2TAA5 492 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 CCDC40Q4G0X9 1142 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 PTPN20Q4JDL3 420 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 ZNF805Q5CZA5 627 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 CARD16Q5EG05 197 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 LRRC73Q5JTD7 316 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 BRMS1LQ5PSV4 323 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 FAXCQ5TGI0 409 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 RETSATQ6NUM9 610 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 LVRNQ6Q4G3 990 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 ZNF783Q6ZMS7 281 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 C11orf57Q6ZUT1 292 aaPredicted RBP5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 VPS36Q86VN1 386 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 ZFAND4Q86XD8 727 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 CCNJLQ8IV13 435 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 PASD1Q8IV76 773 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 SLITRK4Q8IW52 837 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 TRIM59Q8IWR1 403 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 FSTL5Q8N475 847 aaPredicted RBP5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 EHBP1Q8NDI1 1231 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 ZNF397Q8NF99 534 aaPredicted RBP5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 OR6K2Q8NGY2 324 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 ZNF564Q8TBZ8 553 aaPredicted RBP5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 NT5C3BQ969T7 300 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 ISG20Q96AZ6 181 aaKnown RBP5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 PGAP3Q96FM1 320 aaPredicted RBP5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 TMEM74Q96NL1 305 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 GSDMAQ96QA5 445 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 NPY6RQ99463 290 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 SPON2Q9BUD6 331 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 GTPBP4Q9BZE4 634 aaKnown RBP5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 INTS2Q9H0H0 1204 aaKnown RBP5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 TKTL2Q9H0I9 626 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 EPN3Q9H201 632 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 ADNPQ9H2P0 1102 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 LRRN3Q9H3W5 708 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 ZDHHC6Q9H6R6 413 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 WDCPQ9H6R7 721 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 UBE2TQ9NPD8 197 aaPredicted RBP5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 MBNL1Q9NR56 388 aaKnown RBP5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 TMPRSS4Q9NRS4 437 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 RRN3Q9NYV6 651 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 FOXJ2Q9P0K8 574 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 SEPT10Q9P0V9 454 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 SIRPGQ9P1W8 387 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 HECAQ9UBI9 543 aaPredicted RBP5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 GULP1Q9UBP9 304 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 PCDHGC3Q9UN70 934 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 PAXBP1Q9Y5B6 917 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 ACTL7AQ9Y615 435 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 ZFHX3Q15911 3703 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 ICE1Q9Y2F5 2266 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 DOCK4Q8N1I0 1966 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 CXorf51AA0A1B0GTR3 108 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 AGRPO00253 132 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 TOR1BO14657 336 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 PSMA7O14818 248 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 GSRP00390 522 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 UGT2B4P06133 528 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 HSP90AA1P07900 732 aaKnown RBP5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 ALPIP09923 528 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 CD82P27701 267 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 ACVRL1P37023 503 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 EIF4A3P38919 411 aaKnown RBP5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 SULT1E1P49888 294 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 PEX5P50542 639 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 BLKP51451 505 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 SLC6A3Q01959 620 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 GNA12Q03113 381 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 IRF4Q15306 451 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 SKIDA1Q1XH10 827 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 KLHL40Q2TBA0 621 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 CERCAMQ5T4B2 595 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 ACBD5Q5T8D3 534 aaPredicted RBP5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 KCTD16Q68DU8 428 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 DESI1Q6ICB0 168 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 TTI2Q6NXR4 508 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 GJB7Q6PEY0 223 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 FOXR2Q6PJQ5 311 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 LRRC31Q6UY01 552 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 ENOSF1Q7L5Y1 443 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 TMPRSS9Q7Z410 1059 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 SPRED1Q7Z699 444 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 PTRH1Q86Y79 214 aaKnown RBP5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 HID1Q8IV36 788 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 HSCBQ8IWL3 235 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 FMR1NBQ8N0W7 255 aaPredicted RBP5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 RYBPQ8N488 228 aaPredicted RBP5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 FAM26EQ8N5C1 309 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 ZSCAN1Q8NBB4 408 aa5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 TP53I13Q8NBR0 393 aaPredicted RBP5.19□□□□□ -1.58
SNRNP40-204ENST00000474025 C1orf131Q8NDD1 294 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms