RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 FAM9BQ8IZU0 186 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 ARL14EPQ8N8R7 260 aaPredicted RBP4.42□□□□□ -1.7
BRCA1-212ENST00000473961 MCUQ8NE86 351 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 GABPB2Q8TAK5 448 aaPredicted RBP4.42□□□□□ -1.7
BRCA1-212ENST00000473961 ZNF398Q8TD17 642 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 UBE2Q2Q8WVN8 375 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 NEU4Q8WWR8 484 aaPredicted RBP4.42□□□□□ -1.7
BRCA1-212ENST00000473961 PRPF31Q8WWY3 499 aaKnown RBP4.42□□□□□ -1.7
BRCA1-212ENST00000473961 TUBB6Q9BUF5 446 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 EFHD1Q9BUP0 239 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 APOL6Q9BWW8 343 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 TM2D2Q9BX73 214 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 FRMD8Q9BZ67 464 aaPredicted RBP4.42□□□□□ -1.7
BRCA1-212ENST00000473961 NUF2Q9BZD4 464 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 POLR1BQ9H9Y6 1135 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 KIF9Q9HAQ2 790 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 PPIEQ9UNP9 301 aaKnown RBP4.42□□□□□ -1.7
BRCA1-212ENST00000473961 ZNF711Q9Y462 761 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 INSL6Q9Y581 213 aa4.42□□□□□ -1.7
BRCA1-212ENST00000473961 A0A1W2PQF6 199 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 SLC22A23A1A5C7 686 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 CBY3A6NI87 242 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 GLOD5A6NK44 160 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 TSPY2A6NKD2 308 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 A8MV72 311 aaPredicted RBP4.41□□□□□ -1.7
BRCA1-212ENST00000473961 FOXO6A8MYZ6 492 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 H7C0S8 307 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 SH2B2O14492 632 aaPredicted RBP4.41□□□□□ -1.7
BRCA1-212ENST00000473961 GPC4O75487 556 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 NEURL1O76050 574 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 OR2C1O95371 312 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 GCP02774 474 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 MYZAPP0CAP1 466 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 TSPY3P0CV98 308 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 TSPY8P0CW00 308 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 SP100P23497 879 aaPredicted RBP4.41□□□□□ -1.7
BRCA1-212ENST00000473961 NRIP1P48552 1158 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 MFAP4P55083 255 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 F2RL1P55085 397 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 TSPY1Q01534 308 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 CEBPZQ03701 1054 aaKnown RBP4.41□□□□□ -1.7
BRCA1-212ENST00000473961 DPTQ07507 201 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 ACSM2AQ08AH3 577 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 ITGADQ13349 1161 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 FGFBP1Q14512 234 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 PCGF3Q3KNV8 242 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 SLC9C1Q4G0N8 1177 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 SYTL3Q4VX76 610 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 BMP2KLQ5H9B9 411 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 TCP11X2Q5H9J9 407 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 GARNL3Q5VVW2 1013 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 ACSM2BQ68CK6 577 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 FCRLBQ6BAA4 426 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 JADE1Q6IE81 842 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 FAM57BQ71RH2 274 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 UBE2Q1Q7Z7E8 422 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 SERPINA11Q86U17 422 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 EPHX4Q8IUS5 362 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 APPL2Q8NEU8 664 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 OR4N2Q8NGD1 307 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 RASSF8Q8NHQ8 419 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 GSDMBQ8TAX9 411 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 NSMCE1Q8WV22 266 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 ATOH1Q92858 354 aaPredicted RBP4.41□□□□□ -1.7
BRCA1-212ENST00000473961 FBXL8Q96CD0 374 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 ZNF419Q96HQ0 510 aaPredicted RBP4.41□□□□□ -1.7
BRCA1-212ENST00000473961 ZMAT2Q96NC0 199 aaKnown RBP4.41□□□□□ -1.7
BRCA1-212ENST00000473961 WDFY2Q96P53 400 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 FAM118BQ9BPY3 351 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 OSGEPL1Q9H4B0 414 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 MOV10Q9HCE1 1003 aaKnown RBP4.41□□□□□ -1.7
BRCA1-212ENST00000473961 ZNF304Q9HCX3 659 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 PDE7BQ9NP56 450 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 ASB6Q9NWX5 421 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 PSD3Q9NYI0 1048 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 PLK2Q9NYY3 685 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 OGFRQ9NZT2 677 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 SEL1LQ9UBV2 794 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 SEC63Q9UGP8 760 aaKnown RBP4.41□□□□□ -1.7
BRCA1-212ENST00000473961 LAMP3Q9UQV4 416 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 RAP2CQ9Y3L5 183 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 MAU2Q9Y6X3 613 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 FAM169AQ9Y6X4 670 aa4.41□□□□□ -1.7
BRCA1-212ENST00000473961 NPIPB11E5RHQ5 1161 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 SNAP23O00161 211 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 SLC25A17O43808 307 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 GJB3O75712 270 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 PGM3O95394 542 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 ADRB2P07550 413 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 UNGP13051 313 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-212ENST00000473961 CTPS1P17812 591 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 CD58P19256 250 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 PLA2G5P39877 138 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 CAPZA2P47755 286 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 CAMPP49913 170 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 LIG4P49917 911 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 STAT2P52630 851 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 EFNA5P52803 228 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 GALCP54803 685 aa4.4□□□□□ -1.71
BRCA1-212ENST00000473961 KRTAP10-7P60409 375 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms