RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 DEFB124Q8NES8 71 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 HDAC11Q96DB2 347 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 FEM1CQ96JP0 617 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 TSGA13Q96PP4 275 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 NUDCD1Q96RS6 583 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 C1QTNF2Q9BXJ5 285 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 SLC17A9Q9BYT1 436 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 NOD2Q9HC29 1040 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 NT5MQ9NPB1 228 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 PCDH12Q9NPG4 1184 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 TM7SF3Q9NS93 570 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 HEY1Q9Y5J3 304 aa19.11■□□□□ 0.65
PTCD3-210ENST00000473829 TLR4O00206 839 aa19.1■□□□□ 0.65
PTCD3-210ENST00000473829 APOL1O14791 398 aa19.1■□□□□ 0.65
PTCD3-210ENST00000473829 MATN3O15232 486 aa19.1■□□□□ 0.65
PTCD3-210ENST00000473829 KCNK5O95279 499 aa19.1■□□□□ 0.65
PTCD3-210ENST00000473829 PAK4O96013 591 aaPredicted RBP19.1■□□□□ 0.65
PTCD3-210ENST00000473829 KRT10P13645 584 aa19.1■□□□□ 0.65
PTCD3-210ENST00000473829 CCNCP24863 283 aa19.1■□□□□ 0.65
PTCD3-210ENST00000473829 HSPA9P38646 679 aaKnown RBP19.1■□□□□ 0.65
PTCD3-210ENST00000473829 DYNLT1P63172 113 aa19.1■□□□□ 0.65
PTCD3-210ENST00000473829 ADCY2Q08462 1091 aa19.1■□□□□ 0.65
PTCD3-210ENST00000473829 HNRNPDQ14103 355 aaKnown RBP19.1■□□□□ 0.65
PTCD3-210ENST00000473829 PSAPL1Q6NUJ1 521 aa19.1■□□□□ 0.65
PTCD3-210ENST00000473829 BRAT1Q6PJG6 821 aa19.1■□□□□ 0.65
PTCD3-210ENST00000473829 SPOCD1Q6ZMY3 1216 aa19.1■□□□□ 0.65
PTCD3-210ENST00000473829 KIAA1328Q86T90 577 aa19.1■□□□□ 0.65
PTCD3-210ENST00000473829 KATNAL2Q8IYT4 538 aa19.1■□□□□ 0.65
PTCD3-210ENST00000473829 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.1■□□□□ 0.65
PTCD3-210ENST00000473829 HCAR2Q8TDS4 363 aa19.1■□□□□ 0.65
PTCD3-210ENST00000473829 NSMCE1Q8WV22 266 aa19.1■□□□□ 0.65
PTCD3-210ENST00000473829 CAMK1GQ96NX5 476 aa19.1■□□□□ 0.65
PTCD3-210ENST00000473829 LGMNQ99538 433 aa19.1■□□□□ 0.65
PTCD3-210ENST00000473829 KLF6Q99612 283 aaPredicted RBP19.1■□□□□ 0.65
PTCD3-210ENST00000473829 WRAP53Q9BUR4 548 aaKnown RBP19.1■□□□□ 0.65
PTCD3-210ENST00000473829 SCUBE2Q9NQ36 999 aa19.1■□□□□ 0.65
PTCD3-210ENST00000473829 PCDHGC4Q9Y5F7 938 aa19.1■□□□□ 0.65
PTCD3-210ENST00000473829 SPEGQ15772 3267 aa19.1■□□□□ 0.65
PTCD3-210ENST00000473829 GRID2IPA4D2P6 1211 aa19.09■□□□□ 0.65
PTCD3-210ENST00000473829 MMP20O60882 483 aa19.09■□□□□ 0.65
PTCD3-210ENST00000473829 ZNF883P0CG24 379 aa19.09■□□□□ 0.65
PTCD3-210ENST00000473829 CSRP1P21291 193 aaKnown RBP19.09■□□□□ 0.65
PTCD3-210ENST00000473829 AKT2P31751 481 aa19.09■□□□□ 0.65
PTCD3-210ENST00000473829 MMP12P39900 470 aa19.09■□□□□ 0.65
PTCD3-210ENST00000473829 NOVA1P51513 510 aaKnown RBP19.09■□□□□ 0.65
PTCD3-210ENST00000473829 IL9RQ01113 521 aa19.09■□□□□ 0.65
PTCD3-210ENST00000473829 TRAF2Q12933 501 aa19.09■□□□□ 0.65
PTCD3-210ENST00000473829 SLC14A1Q13336 389 aa19.09■□□□□ 0.65
PTCD3-210ENST00000473829 IHHQ14623 411 aa19.09■□□□□ 0.65
PTCD3-210ENST00000473829 STAT4Q14765 748 aa19.09■□□□□ 0.65
PTCD3-210ENST00000473829 SHBQ15464 509 aa19.09■□□□□ 0.65
PTCD3-210ENST00000473829 SLC45A4Q5BKX6 768 aa19.09■□□□□ 0.65
PTCD3-210ENST00000473829 CFAP58Q5T655 872 aa19.09■□□□□ 0.65
PTCD3-210ENST00000473829 TIGD7Q6NT04 549 aaPredicted RBP19.09■□□□□ 0.65
PTCD3-210ENST00000473829 IQCHQ86VS3 1027 aa19.09■□□□□ 0.65
PTCD3-210ENST00000473829 BBS5Q8N3I7 341 aa19.09■□□□□ 0.65
PTCD3-210ENST00000473829 LRRC57Q8N9N7 239 aa19.09■□□□□ 0.65
PTCD3-210ENST00000473829 OR13H1Q8NG92 308 aa19.09■□□□□ 0.65
PTCD3-210ENST00000473829 FATE1Q969F0 183 aa19.09■□□□□ 0.65
PTCD3-210ENST00000473829 BMFQ96LC9 184 aa19.09■□□□□ 0.65
PTCD3-210ENST00000473829 OLFM3Q96PB7 478 aa19.09■□□□□ 0.65
PTCD3-210ENST00000473829 ATP8A1Q9Y2Q0 1164 aa19.09■□□□□ 0.65
PTCD3-210ENST00000473829 CABIN1Q9Y6J0 2220 aa19.08■□□□□ 0.65
PTCD3-210ENST00000473829 POM121BA6NF01 834 aa19.08■□□□□ 0.64
PTCD3-210ENST00000473829 GOLGA6L6A8MZA4 724 aa19.08■□□□□ 0.64
PTCD3-210ENST00000473829 RIOK3O14730 519 aaKnown RBP19.08■□□□□ 0.64
PTCD3-210ENST00000473829 HTRA2O43464 458 aaPredicted RBP19.08■□□□□ 0.64
PTCD3-210ENST00000473829 SH3BP5O60239 455 aa19.08■□□□□ 0.64
PTCD3-210ENST00000473829 HLA-DQB2P05538 268 aa19.08■□□□□ 0.64
PTCD3-210ENST00000473829 MX2P20592 715 aa19.08■□□□□ 0.64
PTCD3-210ENST00000473829 XPAP23025 273 aaPredicted RBP19.08■□□□□ 0.64
PTCD3-210ENST00000473829 SUOXP51687 545 aa19.08■□□□□ 0.64
PTCD3-210ENST00000473829 NAP1L1P55209 391 aaKnown RBP19.08■□□□□ 0.64
PTCD3-210ENST00000473829 GSDMDP57764 484 aa19.08■□□□□ 0.64
PTCD3-210ENST00000473829 PPIDQ08752 370 aaKnown RBP19.08■□□□□ 0.64
PTCD3-210ENST00000473829 TMEM52BQ4KMG9 183 aa19.08■□□□□ 0.64
PTCD3-210ENST00000473829 ODF2Q5BJF6 829 aa19.08■□□□□ 0.64
PTCD3-210ENST00000473829 B4GALNT4Q76KP1 1039 aa19.08■□□□□ 0.64
PTCD3-210ENST00000473829 ABI3BPQ7Z7G0 1075 aa19.08■□□□□ 0.64
PTCD3-210ENST00000473829 CCDC13Q8IYE1 715 aa19.08■□□□□ 0.64
PTCD3-210ENST00000473829 CCNYQ8ND76 341 aa19.08■□□□□ 0.64
PTCD3-210ENST00000473829 CXorf40AQ8TE69 158 aa19.08■□□□□ 0.64
PTCD3-210ENST00000473829 ELF4Q99607 663 aaPredicted RBP19.08■□□□□ 0.64
PTCD3-210ENST00000473829 SEMA3CQ99985 751 aa19.08■□□□□ 0.64
PTCD3-210ENST00000473829 MAK16Q9BXY0 300 aaKnown RBP19.08■□□□□ 0.64
PTCD3-210ENST00000473829 CAAP1Q9H8G2 361 aa19.08■□□□□ 0.64
PTCD3-210ENST00000473829 GDF3Q9NR23 364 aa19.08■□□□□ 0.64
PTCD3-210ENST00000473829 RBM22Q9NW64 420 aaKnown RBP eCLIP19.08■□□□□ 0.64
PTCD3-210ENST00000473829 SAE1Q9UBE0 346 aaPredicted RBP19.08■□□□□ 0.64
PTCD3-210ENST00000473829 COQ6Q9Y2Z9 468 aa19.08■□□□□ 0.64
PTCD3-210ENST00000473829 hCG_1818297A0A087WSY0 165 aa19.07■□□□□ 0.64
PTCD3-210ENST00000473829 A0A1B0GTQ1 180 aa19.07■□□□□ 0.64
PTCD3-210ENST00000473829 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.07■□□□□ 0.64
PTCD3-210ENST00000473829 KCNK1O00180 336 aa19.07■□□□□ 0.64
PTCD3-210ENST00000473829 THEGLP0DJG4 465 aa19.07■□□□□ 0.64
PTCD3-210ENST00000473829 CCNB1P14635 433 aa19.07■□□□□ 0.64
PTCD3-210ENST00000473829 PECAM1P16284 738 aaPredicted RBP19.07■□□□□ 0.64
PTCD3-210ENST00000473829 CTNNA1P35221 906 aaKnown RBP19.07■□□□□ 0.64
PTCD3-210ENST00000473829 CCT8P50990 548 aa19.07■□□□□ 0.64
PTCD3-210ENST00000473829 FAM193AP78312 1265 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms