RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 FAM110DQ8TAY7 271 aaPredicted RBP4.8□□□□□ -1.64
CNOT4-209ENST00000473470 THOC3Q96J01 351 aaKnown RBP4.8□□□□□ -1.64
CNOT4-209ENST00000473470 ZNF333Q96JL9 665 aa4.8□□□□□ -1.64
CNOT4-209ENST00000473470 CAPNS2Q96L46 248 aa4.8□□□□□ -1.64
CNOT4-209ENST00000473470 TEFMQ96QE5 360 aaKnown RBP4.8□□□□□ -1.64
CNOT4-209ENST00000473470 HDHD5Q9BXW7 423 aa4.8□□□□□ -1.64
CNOT4-209ENST00000473470 CADM1Q9BY67 442 aaKnown RBP4.8□□□□□ -1.64
CNOT4-209ENST00000473470 FRMD8Q9BZ67 464 aaPredicted RBP4.8□□□□□ -1.64
CNOT4-209ENST00000473470 GPR63Q9BZJ6 419 aa4.8□□□□□ -1.64
CNOT4-209ENST00000473470 ARHGAP39Q9C0H5 1083 aa4.8□□□□□ -1.64
CNOT4-209ENST00000473470 CLPBQ9H078 707 aa4.8□□□□□ -1.64
CNOT4-209ENST00000473470 IL21RQ9HBE5 538 aa4.8□□□□□ -1.64
CNOT4-209ENST00000473470 Q9N2J8 555 aa4.8□□□□□ -1.64
CNOT4-209ENST00000473470 TMEM248Q9NWD8 314 aa4.8□□□□□ -1.64
CNOT4-209ENST00000473470 NCKIPSDQ9NZQ3 722 aa4.8□□□□□ -1.64
CNOT4-209ENST00000473470 SELENONQ9NZV5 590 aa4.8□□□□□ -1.64
CNOT4-209ENST00000473470 C10orf71Q711Q0 1435 aa4.8□□□□□ -1.64
CNOT4-209ENST00000473470 E9PCH4 1651 aa4.8□□□□□ -1.64
CNOT4-209ENST00000473470 PIK3C2AO00443 1686 aa4.8□□□□□ -1.64
CNOT4-209ENST00000473470 CCDC88AQ3V6T2 1871 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 PLEKHG2Q9H7P9 1386 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 TRBV5-7A0A0A0MS05 114 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 SYN3O14994 580 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 HBP1O60381 514 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 TMCC1O94876 653 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 METTL18O95568 372 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 ALPLP05186 524 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 MMP3P08254 477 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 CSF1P09603 554 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 ACP5P13686 325 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 TKTP29401 623 aaKnown RBP4.79□□□□□ -1.64
CNOT4-209ENST00000473470 CLCNKBP51801 687 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 MPP1Q00013 466 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 ROR2Q01974 943 aaKnown RBP4.79□□□□□ -1.64
CNOT4-209ENST00000473470 DDX10Q13206 875 aaKnown RBP4.79□□□□□ -1.64
CNOT4-209ENST00000473470 OTUD1Q5VV17 481 aaPredicted RBP4.79□□□□□ -1.64
CNOT4-209ENST00000473470 NUGGCQ68CJ6 796 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 KIAA1324Q6UXG2 1013 aaKnown RBP4.79□□□□□ -1.64
CNOT4-209ENST00000473470 SYNE3Q6ZMZ3 975 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 VPS52Q8N1B4 723 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 C7orf57Q8NEG2 295 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 PPHLN1Q8NEY8 458 aaKnown RBP4.79□□□□□ -1.64
CNOT4-209ENST00000473470 GABPB2Q8TAK5 448 aaPredicted RBP4.79□□□□□ -1.64
CNOT4-209ENST00000473470 HDAC7Q8WUI4 952 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 KCNJ9Q92806 393 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 FAM122AQ96E09 287 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 HERC2P3Q9BVR0 1158 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 CATSPERBQ9H7T0 1116 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 SIRT3Q9NTG7 399 aaPredicted RBP4.79□□□□□ -1.64
CNOT4-209ENST00000473470 HIF1ANQ9NWT6 349 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 PLK2Q9NYY3 685 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 FBXO40Q9UH90 709 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 PNMA2Q9UL42 364 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 ERBINQ96RT1 1412 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 WNK3Q9BYP7 1800 aa4.79□□□□□ -1.64
CNOT4-209ENST00000473470 PASKQ96RG2 1323 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 COL5A2P05997 1499 aaPredicted RBP4.78□□□□□ -1.64
CNOT4-209ENST00000473470 GLTPD2A6NH11 291 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 A6NLC8 198 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 KRTAP29-1A8MX34 341 aaPredicted RBP4.78□□□□□ -1.64
CNOT4-209ENST00000473470 TNFRSF13BO14836 293 aaPredicted RBP4.78□□□□□ -1.64
CNOT4-209ENST00000473470 SMAD6O43541 496 aaKnown RBP4.78□□□□□ -1.64
CNOT4-209ENST00000473470 UNGP13051 313 aaPredicted RBP4.78□□□□□ -1.64
CNOT4-209ENST00000473470 KLRC2P26717 231 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 EGR4Q05215 589 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 ZBTB16Q05516 673 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 G3BP1Q13283 466 aaKnown RBP eCLIP4.78□□□□□ -1.64
CNOT4-209ENST00000473470 SLC4A8Q2Y0W8 1093 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 CBWD5Q5RIA9 395 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 NCAPH2Q6IBW4 605 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 DENND1BQ6P3S1 775 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 HEATR4Q86WZ0 1026 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 FBXL14Q8N1E6 418 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 TSPYL6Q8N831 410 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 PCYOX1LQ8NBM8 494 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 LINS1Q8NG48 757 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 FAR1Q8WVX9 515 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 PPP1R10Q96QC0 940 aaKnown RBP4.78□□□□□ -1.64
CNOT4-209ENST00000473470 B3GNT4Q9C0J1 378 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 HIPK3Q9H422 1215 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 JMJD4Q9H9V9 463 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 ZNF304Q9HCX3 659 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 ZDHHC7Q9NXF8 308 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 UPB1Q9UBR1 384 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 FZD10Q9ULW2 581 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 TBX20Q9UMR3 447 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 TTC3P53804 2025 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 CLTCL1P53675 1640 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 CRB1P82279 1406 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 LAMB4A4D0S4 1761 aa4.78□□□□□ -1.64
CNOT4-209ENST00000473470 LMO7Q8WWI1 1683 aa4.77□□□□□ -1.65
CNOT4-209ENST00000473470 C17orf102A2RUQ5 167 aa4.77□□□□□ -1.65
CNOT4-209ENST00000473470 RNMTO43148 476 aaKnown RBP4.77□□□□□ -1.65
CNOT4-209ENST00000473470 STRNO43815 780 aa4.77□□□□□ -1.65
CNOT4-209ENST00000473470 DDNO94850 711 aaPredicted RBP4.77□□□□□ -1.65
CNOT4-209ENST00000473470 ARSBP15848 533 aa4.77□□□□□ -1.65
CNOT4-209ENST00000473470 ELF1P32519 619 aa4.77□□□□□ -1.65
CNOT4-209ENST00000473470 SKIV2L2P42285 1042 aaKnown RBP4.77□□□□□ -1.65
CNOT4-209ENST00000473470 CDKN2AP42771 156 aaKnown RBP4.77□□□□□ -1.65
CNOT4-209ENST00000473470 NR1H2P55055 460 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms