RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 TBATAQ96M53 351 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 FUCA2Q9BTY2 467 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 EDEM3Q9BZQ6 932 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 SEMA6CQ9H3T2 930 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 RRN3Q9NYV6 651 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 STAP1Q9ULZ2 295 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 ANKRD36A6QL64 1941 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 SDK2Q58EX2 2172 aa12.76□□□□□ -0.37
TRAF4-209ENST00000473421 BICDL2A1A5D9 508 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 PIGNO95427 931 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 POP4O95707 220 aaKnown RBP12.75□□□□□ -0.37
TRAF4-209ENST00000473421 GNA14O95837 355 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 F9P00740 461 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 ITGB2P05107 769 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 LIPCP11150 499 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 CCL4P13236 92 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 CCKBRP32239 447 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 CDH5P33151 784 aaPredicted RBP12.75□□□□□ -0.37
TRAF4-209ENST00000473421 SRP54P61011 504 aaKnown RBP12.75□□□□□ -0.37
TRAF4-209ENST00000473421 YPEL5P62699 121 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 TLE1Q04724 770 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 INPP5AQ14642 412 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 C16orf72Q14CZ0 275 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 EXOC3L4Q17RC7 722 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 ENPP7Q6UWV6 458 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 GBP6Q6ZN66 633 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 ZSWIM9Q86XI8 627 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 CCNJLQ8IV13 435 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 FAM71AQ8IYT1 594 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 PELI3Q8N2H9 469 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 GPR156Q8NFN8 814 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 WDR48Q8TAF3 677 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 CPA5Q8WXQ8 436 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 OR1E3Q8WZA6 343 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 GLMNQ92990 594 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 C18orf8Q96DM3 657 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 EXOC2Q96KP1 924 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 ARHGEF17Q96PE2 2063 aaPredicted RBP12.75□□□□□ -0.37
TRAF4-209ENST00000473421 ARHGAP9Q9BRR9 750 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 MRPL40Q9NQ50 206 aaKnown RBP12.75□□□□□ -0.37
TRAF4-209ENST00000473421 PPARGC1AQ9UBK2 798 aaKnown RBP12.75□□□□□ -0.37
TRAF4-209ENST00000473421 RNF215Q9Y6U7 377 aa12.75□□□□□ -0.37
TRAF4-209ENST00000473421 NBASA2RRP1 2371 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 TMEM202A6NGA9 273 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 B4GAT1O43505 415 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 GADD45BO75293 160 aaPredicted RBP12.74□□□□□ -0.37
TRAF4-209ENST00000473421 TMCC1O94876 653 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 LRIG2O94898 1065 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 GSRP00390 522 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 JMJD7P0C870 316 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 ADRA1BP35368 520 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 MAPK10P53779 464 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 IGFBP7Q16270 282 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 CDO1Q16878 200 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 SKIDA1Q1XH10 827 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 RWDD4Q6NW29 188 aaKnown RBP12.74□□□□□ -0.37
TRAF4-209ENST00000473421 NOP9Q86U38 636 aaKnown RBP12.74□□□□□ -0.37
TRAF4-209ENST00000473421 ZDHHC17Q8IUH5 632 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 SLITRK4Q8IW52 837 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 PYROXD2Q8N2H3 581 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 CCDC185Q8N715 623 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 GPT2Q8TD30 523 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 CXorf40AQ8TE69 158 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 APOOQ9BUR5 198 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 RDH14Q9HBH5 336 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 OR12D3Q9UGF7 316 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 DOLKQ9UPQ8 538 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 ATP6V1DQ9Y5K8 247 aa12.74□□□□□ -0.37
TRAF4-209ENST00000473421 UTP20O75691 2785 aaKnown RBP12.73□□□□□ -0.37
TRAF4-209ENST00000473421 GOLGA6L4A6NEF3 574 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 KDELR3O43731 214 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 BUB1BO60566 1050 aaPredicted RBP12.73□□□□□ -0.37
TRAF4-209ENST00000473421 RASGRP1O95267 797 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 CTSEP14091 401 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 CYP11B1P15538 503 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 SNRPD1P62314 119 aaKnown RBP12.73□□□□□ -0.37
TRAF4-209ENST00000473421 EIF3IQ13347 325 aaKnown RBP12.73□□□□□ -0.37
TRAF4-209ENST00000473421 NFATC4Q14934 902 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 LRRC14Q15048 493 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 POLD3Q15054 466 aaPredicted RBP12.73□□□□□ -0.37
TRAF4-209ENST00000473421 ELOCQ15369 112 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 CYTH1Q15438 398 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 CCDC14Q49A88 953 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 TMEM52BQ4KMG9 183 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 MANEAQ5SRI9 462 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 OGFOD3Q6PK18 319 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 LVRNQ6Q4G3 990 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 ZNF574Q6ZN55 896 aaPredicted RBP12.73□□□□□ -0.37
TRAF4-209ENST00000473421 SPRED1Q7Z699 444 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 FSTL5Q8N475 847 aaPredicted RBP12.73□□□□□ -0.37
TRAF4-209ENST00000473421 TMEM35BQ8NCS4 154 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 JOSD2Q8TAC2 188 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 RBM15Q96T37 977 aaKnown RBP eCLIP12.73□□□□□ -0.374e-6■■■■□ 20
TRAF4-209ENST00000473421 SEMA3CQ99985 751 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 SLC12A9Q9BXP2 914 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 TTYH3Q9C0H2 523 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 STRADBQ9C0K7 418 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 TMEM168Q9H0V1 697 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 FGF22Q9HCT0 170 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 PCDH12Q9NPG4 1184 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms