RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 KCNK1O00180 336 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 KPNA3O00505 521 aaPredicted RBP9.2□□□□□ -0.94
SMC4-214ENST00000472991 INSIG1O15503 277 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 OIP5O43482 229 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 LILRB5O75023 590 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 ZNF217O75362 1048 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 GJB3O75712 270 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 RPP40O75818 363 aaKnown RBP9.2□□□□□ -0.94
SMC4-214ENST00000472991 NEBLO76041 1014 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 PIGNO95427 931 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 PRNPP04156 253 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 ATP1A1P05023 1023 aaKnown RBP9.2□□□□□ -0.94
SMC4-214ENST00000472991 HLA-DQB2P05538 268 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 UGT2B4P06133 528 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 CCNB1P14635 433 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 C5AR1P21730 350 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 BCKDHBP21953 392 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 CXCR5P32302 372 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 DRD3P35462 400 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 HSPA9P38646 679 aaKnown RBP9.2□□□□□ -0.94
SMC4-214ENST00000472991 ATP5OP48047 213 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 TPMTP51580 245 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 RENBPP51606 427 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 MAXP61244 160 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 GNG11P61952 73 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 ZBTB16Q05516 673 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 RAD51Q06609 339 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 ZBTB17Q13105 803 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 HNRNPDQ14103 355 aaKnown RBP9.2□□□□□ -0.94
SMC4-214ENST00000472991 PRKD1Q15139 912 aaPredicted RBP9.2□□□□□ -0.94
SMC4-214ENST00000472991 MYLK3Q32MK0 819 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 USP39Q53GS9 565 aaKnown RBP9.2□□□□□ -0.94
SMC4-214ENST00000472991 ZC3H14Q6PJT7 736 aaKnown RBP9.2□□□□□ -0.94
SMC4-214ENST00000472991 ADAT2Q7Z6V5 191 aaKnown RBP9.2□□□□□ -0.94
SMC4-214ENST00000472991 SRLQ86TD4 932 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 SLC13A5Q86YT5 568 aaPredicted RBP9.2□□□□□ -0.94
SMC4-214ENST00000472991 AADATQ8N5Z0 425 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 TMIEQ8NEW7 156 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 GANCQ8TET4 914 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 TFB1MQ8WVM0 346 aaKnown RBP9.2□□□□□ -0.94
SMC4-214ENST00000472991 GAB3Q8WWW8 586 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 ATOH1Q92858 354 aaPredicted RBP9.2□□□□□ -0.94
SMC4-214ENST00000472991 FATE1Q969F0 183 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 VOPP1Q96AW1 172 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 ARRDC3Q96B67 414 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 QKIQ96PU8 341 aaKnown RBP eCLIP9.2□□□□□ -0.946e-7■■■■■ 232.7
SMC4-214ENST00000472991 PSKH2Q96QS6 385 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 MGME1Q9BQP7 344 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 CEP41Q9BYV8 373 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 BRD8Q9H0E9 1235 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 ITM2CQ9NQX7 267 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 KCND1Q9NSA2 647 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 FBXL12Q9NXK8 326 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 SERGEFQ9UGK8 458 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 PPM1HQ9ULR3 514 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 SCML1Q9UN30 329 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 TTLL3Q9Y4R7 772 aa9.2□□□□□ -0.94
SMC4-214ENST00000472991 HACD1B0YJ81 288 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 CEP104O60308 925 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 RNASEH2AO75792 299 aaKnown RBP9.19□□□□□ -0.94
SMC4-214ENST00000472991 POP4O95707 220 aaKnown RBP9.19□□□□□ -0.94
SMC4-214ENST00000472991 JCHAINP01591 159 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 RBP3P10745 1247 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 CR2P20023 1033 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 CNR2P34972 360 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 CSNK1DP48730 415 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 SCNN1BP51168 640 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 EIF3EP60228 445 aaKnown RBP9.19□□□□□ -0.94
SMC4-214ENST00000472991 IFI35P80217 286 aaPredicted RBP9.19□□□□□ -0.94
SMC4-214ENST00000472991 ZNF33AQ06730 810 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 CNTN1Q12860 1018 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 XRCC4Q13426 336 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 BYSLQ13895 437 aaKnown RBP9.19□□□□□ -0.94
SMC4-214ENST00000472991 SLC45A4Q5BKX6 768 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 FAM46CQ5VWP2 391 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 PRR23BQ6ZRT6 265 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 USP30Q70CQ3 517 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 CEP68Q76N32 757 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 PARS2Q7L3T8 475 aaKnown RBP9.19□□□□□ -0.94
SMC4-214ENST00000472991 KBTBD6Q86V97 674 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 CDKL3Q8IVW4 592 aaPredicted RBP9.19□□□□□ -0.94
SMC4-214ENST00000472991 HDDC3Q8N4P3 179 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.19□□□□□ -0.94
SMC4-214ENST00000472991 TEX26Q8N6G2 289 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 CNTD1Q8N815 330 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 ATG4AQ8WYN0 398 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 TRIM44Q96DX7 344 aaPredicted RBP9.19□□□□□ -0.94
SMC4-214ENST00000472991 PPP1R16AQ96I34 528 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 LRIG1Q96JA1 1093 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 NSMCE3Q96MG7 304 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 KLHL32Q96NJ5 620 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 WDR24Q96S15 920 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 IL12RB2Q99665 862 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 OMDQ99983 421 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 POLR1EQ9GZS1 481 aaKnown RBP9.19□□□□□ -0.94
SMC4-214ENST00000472991 IRF2BPLQ9H1B7 796 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 C10orf88Q9H8K7 445 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 DYRK4Q9NR20 520 aa9.19□□□□□ -0.94
SMC4-214ENST00000472991 RBM22Q9NW64 420 aaKnown RBP eCLIP9.19□□□□□ -0.945e-24■■■■■ 66.5
SMC4-214ENST00000472991 WSB2Q9NYS7 404 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms