RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 SLC25A51Q9H1U9 297 aa20.96■□□□□ 0.95
TOP3A-204ENST00000472959 SUSD2Q9UGT4 822 aa20.96■□□□□ 0.95
TOP3A-204ENST00000472959 RAI2Q9Y5P3 530 aa20.96■□□□□ 0.95
TOP3A-204ENST00000472959 NEMP1O14524 444 aa20.95■□□□□ 0.94
TOP3A-204ENST00000472959 CEP104O60308 925 aa20.95■□□□□ 0.94
TOP3A-204ENST00000472959 RNGTTO60942 597 aaKnown RBP20.95■□□□□ 0.94
TOP3A-204ENST00000472959 STK10O94804 968 aaKnown RBP20.95■□□□□ 0.94
TOP3A-204ENST00000472959 PGLSO95336 258 aa20.95■□□□□ 0.94
TOP3A-204ENST00000472959 GNSP15586 552 aa20.95■□□□□ 0.94
TOP3A-204ENST00000472959 NFKBIAP25963 317 aa20.95■□□□□ 0.94
TOP3A-204ENST00000472959 RBL1P28749 1068 aa20.95■□□□□ 0.94
TOP3A-204ENST00000472959 RPS21P63220 83 aaKnown RBP20.95■□□□□ 0.94
TOP3A-204ENST00000472959 TRAF2Q12933 501 aa20.95■□□□□ 0.94
TOP3A-204ENST00000472959 SLC14A2Q15849 920 aa20.95■□□□□ 0.94
TOP3A-204ENST00000472959 PLA2G2CQ5R387 149 aa20.95■□□□□ 0.94
TOP3A-204ENST00000472959 ARMC12Q5T9G4 340 aa20.95■□□□□ 0.94
TOP3A-204ENST00000472959 KIAA1161Q6NSJ0 714 aa20.95■□□□□ 0.94
TOP3A-204ENST00000472959 ERAP2Q6P179 960 aa20.95■□□□□ 0.94
TOP3A-204ENST00000472959 PRPF39Q86UA1 669 aaKnown RBP20.95■□□□□ 0.94
TOP3A-204ENST00000472959 HORMAD1Q86X24 394 aa20.95■□□□□ 0.94
TOP3A-204ENST00000472959 ZSWIM9Q86XI8 627 aa20.95■□□□□ 0.94
TOP3A-204ENST00000472959 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.95■□□□□ 0.94
TOP3A-204ENST00000472959 CEP76Q8TAP6 659 aa20.95■□□□□ 0.94
TOP3A-204ENST00000472959 SLC35B2Q8TB61 432 aa20.95■□□□□ 0.94
TOP3A-204ENST00000472959 SNX19Q92543 992 aa20.95■□□□□ 0.94
TOP3A-204ENST00000472959 IMP4Q96G21 291 aaKnown RBP20.95■□□□□ 0.94
TOP3A-204ENST00000472959 FAM118BQ9BPY3 351 aa20.95■□□□□ 0.94
TOP3A-204ENST00000472959 HINFPQ9BQA5 517 aa20.95■□□□□ 0.94
TOP3A-204ENST00000472959 GLOD4Q9HC38 313 aa20.95■□□□□ 0.94
TOP3A-204ENST00000472959 VPS45Q9NRW7 570 aa20.95■□□□□ 0.94
TOP3A-204ENST00000472959 KLHL8Q9P2G9 620 aaPredicted RBP20.95■□□□□ 0.94
TOP3A-204ENST00000472959 EIF2B4Q9UI10 523 aaKnown RBP20.95■□□□□ 0.94
TOP3A-204ENST00000472959 R3HDM2Q9Y2K5 976 aaKnown RBP20.95■□□□□ 0.94
TOP3A-204ENST00000472959 PCDHB9Q9Y5E1 797 aa20.95■□□□□ 0.94
TOP3A-204ENST00000472959 VPS13AQ96RL7 3174 aa20.94■□□□□ 0.94
TOP3A-204ENST00000472959 A0A1W2PPC4 97 aa20.94■□□□□ 0.94
TOP3A-204ENST00000472959 A0A1W2PQU0 124 aa20.94■□□□□ 0.94
TOP3A-204ENST00000472959 HOXD11P31277 338 aaPredicted RBP20.94■□□□□ 0.94
TOP3A-204ENST00000472959 CXCR5P32302 372 aa20.94■□□□□ 0.94
TOP3A-204ENST00000472959 GNG11P61952 73 aa20.94■□□□□ 0.94
TOP3A-204ENST00000472959 PPP2CBP62714 309 aa20.94■□□□□ 0.94
TOP3A-204ENST00000472959 PPP2CAP67775 309 aa20.94■□□□□ 0.94
TOP3A-204ENST00000472959 SETMARQ53H47 684 aaPredicted RBP20.94■□□□□ 0.94
TOP3A-204ENST00000472959 ZNF567Q8N184 647 aa20.94■□□□□ 0.94
TOP3A-204ENST00000472959 GPR161Q8N6U8 529 aaKnown RBP20.94■□□□□ 0.94
TOP3A-204ENST00000472959 PDCD6IPQ8WUM4 868 aaKnown RBP20.94■□□□□ 0.94
TOP3A-204ENST00000472959 PCDH12Q9NPG4 1184 aa20.94■□□□□ 0.94
TOP3A-204ENST00000472959 TMEM74BQ9NUR3 256 aa20.94■□□□□ 0.94
TOP3A-204ENST00000472959 PHTF1Q9UMS5 762 aa20.94■□□□□ 0.94
TOP3A-204ENST00000472959 DMTF1Q9Y222 760 aa20.94■□□□□ 0.94
TOP3A-204ENST00000472959 ZKSCAN5Q9Y2L8 839 aa20.94■□□□□ 0.94
TOP3A-204ENST00000472959 ZFHX2Q9C0A1 2572 aaPredicted RBP20.94■□□□□ 0.94
TOP3A-204ENST00000472959 SPAG17Q6Q759 2223 aa20.94■□□□□ 0.94
TOP3A-204ENST00000472959 SDK1Q7Z5N4 2213 aa20.94■□□□□ 0.94
TOP3A-204ENST00000472959 OTOGLQ3ZCN5 2332 aa20.93■□□□□ 0.94
TOP3A-204ENST00000472959 PRR5-ARHGAP8B1AHC4 643 aa20.93■□□□□ 0.94
TOP3A-204ENST00000472959 RIOK3O14730 519 aaKnown RBP20.93■□□□□ 0.94
TOP3A-204ENST00000472959 KCNN4O15554 427 aa20.93■□□□□ 0.94
TOP3A-204ENST00000472959 SPINT1O43278 529 aa20.93■□□□□ 0.94
TOP3A-204ENST00000472959 FOXD2O60548 495 aaPredicted RBP20.93■□□□□ 0.94
TOP3A-204ENST00000472959 CPP00450 1065 aa20.93■□□□□ 0.94
TOP3A-204ENST00000472959 FGGP02679 453 aa20.93■□□□□ 0.94
TOP3A-204ENST00000472959 ATP1A1P05023 1023 aaKnown RBP20.93■□□□□ 0.94
TOP3A-204ENST00000472959 MMP2P08253 660 aa20.93■□□□□ 0.94
TOP3A-204ENST00000472959 ZNF806P0C7X5 589 aa20.93■□□□□ 0.94
TOP3A-204ENST00000472959 MAOBP27338 520 aa20.93■□□□□ 0.94
TOP3A-204ENST00000472959 CD86P42081 329 aa20.93■□□□□ 0.94
TOP3A-204ENST00000472959 RPL26P61254 145 aaKnown RBP20.93■□□□□ 0.94
TOP3A-204ENST00000472959 SKOR1P84550 965 aa20.93■□□□□ 0.94
TOP3A-204ENST00000472959 TMEM52BQ4KMG9 183 aa20.93■□□□□ 0.94
TOP3A-204ENST00000472959 TMEM259Q4ZIN3 620 aa20.93■□□□□ 0.94
TOP3A-204ENST00000472959 PID1Q7Z2X4 250 aa20.93■□□□□ 0.94
TOP3A-204ENST00000472959 NDUFAF2Q8N183 169 aa20.93■□□□□ 0.94
TOP3A-204ENST00000472959 C1orf216Q8TAB5 229 aa20.93■□□□□ 0.94
TOP3A-204ENST00000472959 ORAI3Q9BRQ5 295 aa20.93■□□□□ 0.94
TOP3A-204ENST00000472959 MIR1-1HGQ9H1L0 117 aa20.93■□□□□ 0.94
TOP3A-204ENST00000472959 C10orf88Q9H8K7 445 aa20.93■□□□□ 0.94
TOP3A-204ENST00000472959 USP29Q9HBJ7 922 aa20.93■□□□□ 0.94
TOP3A-204ENST00000472959 RPL26L1Q9UNX3 145 aaKnown RBP20.93■□□□□ 0.94
TOP3A-204ENST00000472959 NUMA1Q14980 2115 aa20.93■□□□□ 0.94
TOP3A-204ENST00000472959 THADAQ6YHU6 1953 aa20.92■□□□□ 0.94
TOP3A-204ENST00000472959 SHROOM3Q8TF72 1996 aa20.92■□□□□ 0.94
TOP3A-204ENST00000472959 CFAP69A5D8W1 941 aa20.92■□□□□ 0.94
TOP3A-204ENST00000472959 FZD6O60353 706 aa20.92■□□□□ 0.94
TOP3A-204ENST00000472959 CD68P34810 354 aaPredicted RBP20.92■□□□□ 0.94
TOP3A-204ENST00000472959 IHHQ14623 411 aa20.92■□□□□ 0.94
TOP3A-204ENST00000472959 CSRP2Q16527 193 aa20.92■□□□□ 0.94
TOP3A-204ENST00000472959 DUOXA1Q1HG43 343 aa20.92■□□□□ 0.94
TOP3A-204ENST00000472959 LONRF2Q1L5Z9 754 aa20.92■□□□□ 0.94
TOP3A-204ENST00000472959 ZNF284Q2VY69 593 aa20.92■□□□□ 0.94
TOP3A-204ENST00000472959 LRRC73Q5JTD7 316 aa20.92■□□□□ 0.94
TOP3A-204ENST00000472959 ITPRIPL1Q6GPH6 555 aa20.92■□□□□ 0.94
TOP3A-204ENST00000472959 ADAT2Q7Z6V5 191 aaKnown RBP20.92■□□□□ 0.94
TOP3A-204ENST00000472959 RASGEF1CQ8N431 466 aa20.92■□□□□ 0.94
TOP3A-204ENST00000472959 TADA1Q96BN2 335 aa20.92■□□□□ 0.94
TOP3A-204ENST00000472959 TDRD1Q9BXT4 1180 aaKnown RBP20.92■□□□□ 0.94
TOP3A-204ENST00000472959 DNPEPQ9ULA0 475 aa20.92■□□□□ 0.94
TOP3A-204ENST00000472959 TTC7AQ9ULT0 858 aaPredicted RBP20.92■□□□□ 0.94
TOP3A-204ENST00000472959 ITM2BQ9Y287 266 aa20.92■□□□□ 0.94
TOP3A-204ENST00000472959 A0A1B0GTW7 788 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms