RNA–Protein interactions for RNA: ENST00000472911.1

SMTN-215, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-215ENST00000472911 TBC1D3EA0A087X179 549 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 TBC1D3KA0A087X1G2 549 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 TBC1D3FA6NER0 549 aaPredicted RBP12.21□□□□□ -0.45
SMTN-215ENST00000472911 PATE3B3GLJ2 98 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 TBC1D3LB9A6J9 549 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 TAF4O00268 1085 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 SPINT1O43278 529 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 HLA-DQB2P05538 268 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 TBC1D3HP0C7X1 549 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 CCNB1P14635 433 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 HSPA9P38646 679 aaKnown RBP12.21□□□□□ -0.45
SMTN-215ENST00000472911 NR2C2P49116 596 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 SCNN1BP51168 640 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 NOVA1P51513 510 aaKnown RBP12.21□□□□□ -0.45
SMTN-215ENST00000472911 AP1B1Q10567 949 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 ZBTB17Q13105 803 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 PDK1Q15118 436 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 SYCP2LQ5T4T6 812 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 TBC1D3GQ6DHY5 549 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 TBC1D3CQ6IPX1 549 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 FBXL19Q6PCT2 694 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 ZSWIM9Q86XI8 627 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 CAMK1DQ8IU85 385 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 SYT12Q8IV01 421 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 REXO1L1PQ8IX06 675 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 RGL4Q8IZJ4 473 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 TBC1D3Q8IZP1 549 aaPredicted RBP12.21□□□□□ -0.45
SMTN-215ENST00000472911 BBS5Q8N3I7 341 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 UBL4BQ8N7F7 174 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 DNASE2BQ8WZ79 361 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 SNX19Q92543 992 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 NUDCD1Q96RS6 583 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 TUBGCP5Q96RT8 1024 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 ORAI3Q9BRQ5 295 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 KDM4CQ9H3R0 1056 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 SUV39H2Q9H5I1 410 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 EBF2Q9HAK2 575 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 NOD2Q9HC29 1040 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 RBM22Q9NW64 420 aaKnown RBP eCLIP12.21□□□□□ -0.45
SMTN-215ENST00000472911 DKK3Q9UBP4 350 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 EIF2B4Q9UI10 523 aaKnown RBP12.21□□□□□ -0.45
SMTN-215ENST00000472911 EFR3BQ9Y2G0 817 aa12.21□□□□□ -0.45
SMTN-215ENST00000472911 ASH1LQ9NR48 2969 aaKnown RBP12.21□□□□□ -0.46
SMTN-215ENST00000472911 IGSF10Q6WRI0 2623 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 TSPAN11A1L157 253 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 APOC4-APOC2K7ER74 178 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 KCNK1O00180 336 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 PPP1R12AO14974 1030 aaPredicted RBP12.2□□□□□ -0.46
SMTN-215ENST00000472911 APOC2P02655 101 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 TIMP2P16035 220 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 SERPINA4P29622 427 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 MAPK8P45983 427 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 CCR5P51681 352 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 AP1S1P61966 158 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 IFI35P80217 286 aaPredicted RBP12.2□□□□□ -0.46
SMTN-215ENST00000472911 CCDC15Q0P6D6 951 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 IHHQ14623 411 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 GRM3Q14832 879 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 PRKD1Q15139 912 aaPredicted RBP12.2□□□□□ -0.46
SMTN-215ENST00000472911 LRRC73Q5JTD7 316 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 WDR45BQ5MNZ6 344 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 MEI1Q5TIA1 1274 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 ALG1LQ6GMV1 187 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 TCEAL6Q6IPX3 200 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 ZCCHC9Q8N567 271 aaKnown RBP12.2□□□□□ -0.46
SMTN-215ENST00000472911 C1orf216Q8TAB5 229 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 P3H4Q92791 437 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 TCEAL3Q969E4 200 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 ZNF641Q96N77 438 aaPredicted RBP12.2□□□□□ -0.46
SMTN-215ENST00000472911 ALS2CR12Q96Q35 445 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 IL12RB2Q99665 862 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 CEP41Q9BYV8 373 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 ATP13A3Q9H7F0 1226 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 PREBQ9HCU5 417 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 SCUBE2Q9NQ36 999 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 VPS45Q9NRW7 570 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 GGT7Q9UJ14 662 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 ITM2BQ9Y287 266 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 ATP8A1Q9Y2Q0 1164 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 FADS3Q9Y5Q0 445 aa12.2□□□□□ -0.46
SMTN-215ENST00000472911 A0A1W2PPC4 97 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 GOLGA6L9A6NEM1 432 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 TRAFD1O14545 582 aaPredicted RBP12.19□□□□□ -0.46
SMTN-215ENST00000472911 LATO43561 262 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 AP1G1O43747 822 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 RNGTTO60942 597 aaKnown RBP12.19□□□□□ -0.46
SMTN-215ENST00000472911 JCHAINP01591 159 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 ITIH2P19823 946 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 CD27P26842 260 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 MAT2AP31153 395 aaKnown RBP12.19□□□□□ -0.46
SMTN-215ENST00000472911 HOXD12P35452 270 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 DPP6P42658 865 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 OTUD4Q01804 1114 aaKnown RBP12.19□□□□□ -0.46
SMTN-215ENST00000472911 DSC2Q02487 901 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 BCL2L1Q07817 233 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 ITKQ08881 620 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 TRAF2Q12933 501 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 NOMO1Q15155 1222 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 BZW1Q7L1Q6 419 aaKnown RBP12.19□□□□□ -0.46
SMTN-215ENST00000472911 ZC3H18Q86VM9 953 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms