RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 RAPGEF5Q92565 580 aa15.22■□□□□ 0.03
CALD1-215ENST00000472096 FEM1CQ96JP0 617 aa15.22■□□□□ 0.03
CALD1-215ENST00000472096 SUV39H2Q9H5I1 410 aa15.22■□□□□ 0.03
CALD1-215ENST00000472096 ATP13A3Q9H7F0 1226 aa15.22■□□□□ 0.03
CALD1-215ENST00000472096 GDF3Q9NR23 364 aa15.22■□□□□ 0.03
CALD1-215ENST00000472096 PCDHA13Q9Y5I0 950 aa15.22■□□□□ 0.03
CALD1-215ENST00000472096 LRP4O75096 1905 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 A0A1B0GTQ1 180 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 LRRD1A4D1F6 860 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 ZNF487B1APH4 448 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 TLR4O00206 839 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 NEMP1O14524 444 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 SH3BP5O60239 455 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 TIMP2P16035 220 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 KDELR1P24390 212 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 SERPINA4P29622 427 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 CDC25BP30305 580 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 HSPA9P38646 679 aaKnown RBP15.21■□□□□ 0.03
CALD1-215ENST00000472096 GARSP41250 739 aaKnown RBP15.21■□□□□ 0.03
CALD1-215ENST00000472096 SLC1A1P43005 524 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 RENBPP51606 427 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 AP1S1P61966 158 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 NSUN2Q08J23 767 aaKnown RBP eCLIP15.21■□□□□ 0.03
CALD1-215ENST00000472096 SPA17Q15506 151 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 LRRC38Q5VT99 294 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 GCNT7Q6ZNI0 430 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 TTC7BQ86TV6 843 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 ZSWIM9Q86XI8 627 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 SPATS2Q86XZ4 545 aaKnown RBP15.21■□□□□ 0.03
CALD1-215ENST00000472096 CAMK1DQ8IU85 385 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 TMTC1Q8IUR5 882 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 LRRC49Q8IUZ0 686 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 PGBD5Q8N414 524 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 HCAR2Q8TDS4 363 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 KCTD12Q96CX2 325 aaKnown RBP15.21■□□□□ 0.03
CALD1-215ENST00000472096 ZNF641Q96N77 438 aaPredicted RBP15.21■□□□□ 0.03
CALD1-215ENST00000472096 CAMK1GQ96NX5 476 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 ELF4Q99607 663 aaPredicted RBP15.21■□□□□ 0.03
CALD1-215ENST00000472096 MGME1Q9BQP7 344 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 ANP32EQ9BTT0 268 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 SLC17A9Q9BYT1 436 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 LUC7LQ9NQ29 371 aaKnown RBP15.21■□□□□ 0.03
CALD1-215ENST00000472096 TFR2Q9UP52 801 aa15.21■□□□□ 0.03
CALD1-215ENST00000472096 ARID1BQ8NFD5 2236 aaPredicted RBP15.21■□□□□ 0.03
CALD1-215ENST00000472096 A0A0A6YYK5 440 aaPredicted RBP15.2■□□□□ 0.02
CALD1-215ENST00000472096 IGLON5A6NGN9 336 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 C3orf70A6NLC5 250 aaPredicted RBP15.2■□□□□ 0.02
CALD1-215ENST00000472096 RAD51BO15315 384 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 FLRT2O43155 660 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 SPOPO43791 374 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 PCDHGA12O60330 932 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 DFNA5O60443 496 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 MAGEC1O60732 1142 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 NDUFA10O95299 355 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 MAP3K6O95382 1288 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 KRT1P04264 644 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 CR2P20023 1033 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 COMTP21964 271 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 XPAP23025 273 aaPredicted RBP15.2■□□□□ 0.02
CALD1-215ENST00000472096 MMP13P45452 471 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 SUOXP51687 545 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 IL9RQ01113 521 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 ELP6Q0PNE2 266 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 CFAP58Q5T655 872 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 BRAT1Q6PJG6 821 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 DBX2Q6ZNG2 339 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 ABI3BPQ7Z7G0 1075 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 VSIG1Q86XK7 387 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 RHOT1Q8IXI2 618 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 BBS5Q8N3I7 341 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 NSMCE1Q8WV22 266 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 ECHDC3Q96DC8 303 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 NSMCE3Q96MG7 304 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 RNF157Q96PX1 679 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 C1QTNF2Q9BXJ5 285 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 ERVMER34-1Q9H9K5 563 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 PCOLCE2Q9UKZ9 415 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 HYOU1Q9Y4L1 999 aa15.2■□□□□ 0.02
CALD1-215ENST00000472096 EPN1Q9Y6I3 576 aaPredicted RBP15.2■□□□□ 0.02
CALD1-215ENST00000472096 SPAARA0A1B0GVQ0 90 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 A6NNZ2 444 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 YKT6O15498 198 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 CBFA2T3O75081 653 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 THEGLP0DJG4 465 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 ITIH2P19823 946 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 NOP2P46087 812 aaKnown RBP15.19■□□□□ 0.02
CALD1-215ENST00000472096 SCNN1BP51168 640 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 CLDN2P57739 230 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 FAM193AP78312 1265 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 GBE1Q04446 702 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 BCL2L1Q07817 233 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 HNRNPDQ14103 355 aaKnown RBP15.19■□□□□ 0.02
CALD1-215ENST00000472096 SHBQ15464 509 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 UGP2Q16851 508 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 TMEM52BQ4KMG9 183 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 PRAMEF14Q5SWL7 426 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 RAD9BQ6WBX8 426 aa15.19■□□□□ 0.02
CALD1-215ENST00000472096 KYAT3Q6YP21 454 aaKnown RBP15.19■□□□□ 0.02
CALD1-215ENST00000472096 PTAR1Q7Z6K3 402 aaPredicted RBP15.19■□□□□ 0.02
CALD1-215ENST00000472096 OXR1Q8N573 874 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms