RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 HDAC4P56524 1084 aa4.75□□□□□ -1.65
CD46-213ENST00000471987 TNFAIP1Q13829 316 aa4.75□□□□□ -1.65
CD46-213ENST00000471987 ACCSLQ4AC99 568 aa4.75□□□□□ -1.65
CD46-213ENST00000471987 CEP85LQ5SZL2 805 aa4.75□□□□□ -1.65
CD46-213ENST00000471987 ADAM5Q6NVV9 412 aa4.75□□□□□ -1.65
CD46-213ENST00000471987 FOXL2NBQ6ZUU3 175 aa4.75□□□□□ -1.65
CD46-213ENST00000471987 PRSS45Q7RTY3 260 aa4.75□□□□□ -1.65
CD46-213ENST00000471987 TMEM57Q8N5G2 664 aa4.75□□□□□ -1.65
CD46-213ENST00000471987 GDPD5Q8WTR4 605 aa4.75□□□□□ -1.65
CD46-213ENST00000471987 PAGR1Q9BTK6 254 aa4.75□□□□□ -1.65
CD46-213ENST00000471987 CYSLTR2Q9NS75 346 aa4.75□□□□□ -1.65
CD46-213ENST00000471987 ZNF224Q9NZL3 707 aa4.75□□□□□ -1.65
CD46-213ENST00000471987 KIF17Q9P2E2 1029 aa4.75□□□□□ -1.65
CD46-213ENST00000471987 TYW5A2RUC4 315 aaKnown RBP4.74□□□□□ -1.65
CD46-213ENST00000471987 FAM172BPA6NC97 362 aa4.74□□□□□ -1.65
CD46-213ENST00000471987 ATP2C2O75185 946 aa4.74□□□□□ -1.65
CD46-213ENST00000471987 GLIPR1P48060 266 aa4.74□□□□□ -1.65
CD46-213ENST00000471987 KRTAP10-5P60370 271 aa4.74□□□□□ -1.65
CD46-213ENST00000471987 ACTR2P61160 394 aa4.74□□□□□ -1.65
CD46-213ENST00000471987 RBBP5Q15291 538 aaKnown RBP4.74□□□□□ -1.65
CD46-213ENST00000471987 FAM122CQ6P4D5 195 aa4.74□□□□□ -1.65
CD46-213ENST00000471987 TRMT1LQ7Z2T5 733 aaKnown RBP4.74□□□□□ -1.65
CD46-213ENST00000471987 ZC3HC1Q86WB0 502 aaKnown RBP4.74□□□□□ -1.65
CD46-213ENST00000471987 LURAP1LQ8IV03 231 aa4.74□□□□□ -1.65
CD46-213ENST00000471987 C3orf30Q96M34 536 aa4.74□□□□□ -1.65
CD46-213ENST00000471987 SLC9A2Q9UBY0 812 aa4.74□□□□□ -1.65
CD46-213ENST00000471987 SIX4Q9UIU6 781 aa4.74□□□□□ -1.65
CD46-213ENST00000471987 VDAC3Q9Y277 283 aa4.74□□□□□ -1.65
CD46-213ENST00000471987 ANP32CO43423 234 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 RGS11O94810 467 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 CRYAAP02489 173 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 LINC00271P0C7V0 271 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 VEGFAP15692 232 aaPredicted RBP4.73□□□□□ -1.65
CD46-213ENST00000471987 ZNF8P17098 575 aaPredicted RBP4.73□□□□□ -1.65
CD46-213ENST00000471987 SRD5A1P18405 259 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 RYKP34925 604 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 BLKP51451 505 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 ZNF132P52740 706 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 PHEXP78562 749 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 ZBTB17Q13105 803 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 TRIM14Q14142 442 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 CCDC6Q16204 474 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 EDRF1Q3B7T1 1238 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 CES5AQ6NT32 575 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 SFR1Q86XK3 245 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 CCDC146Q8IYE0 955 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 ZNF441Q8N8Z8 693 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 CREB3L4Q8TEY5 395 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 AFG1LQ8WV93 481 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 FIG4Q92562 907 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 TANKQ92844 425 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 GDAQ9Y2T3 454 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 ADAM18Q9Y3Q7 739 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 DAAM1Q9Y4D1 1078 aa4.73□□□□□ -1.65
CD46-213ENST00000471987 ATXN2Q99700 1313 aaKnown RBP4.72□□□□□ -1.65
CD46-213ENST00000471987 ARHGAP10A1A4S6 786 aa4.72□□□□□ -1.65
CD46-213ENST00000471987 ZIC3O60481 467 aa4.72□□□□□ -1.65
CD46-213ENST00000471987 MTA2O94776 668 aa4.72□□□□□ -1.65
CD46-213ENST00000471987 NDUFB4O95168 129 aa4.72□□□□□ -1.65
CD46-213ENST00000471987 MCM3P25205 808 aa4.72□□□□□ -1.65
CD46-213ENST00000471987 PIGAP37287 484 aa4.72□□□□□ -1.65
CD46-213ENST00000471987 CXCR3P49682 368 aa4.72□□□□□ -1.65
CD46-213ENST00000471987 ZNF155Q12901 538 aaPredicted RBP4.72□□□□□ -1.65
CD46-213ENST00000471987 DMP1Q13316 513 aaPredicted RBP4.72□□□□□ -1.65
CD46-213ENST00000471987 ARHGEF6Q15052 776 aa4.72□□□□□ -1.65
CD46-213ENST00000471987 BRD3Q15059 726 aa4.72□□□□□ -1.65
CD46-213ENST00000471987 OASLQ15646 514 aaKnown RBP4.72□□□□□ -1.65
CD46-213ENST00000471987 AMZ1Q400G9 498 aa4.72□□□□□ -1.65
CD46-213ENST00000471987 CPXM2Q8N436 756 aa4.72□□□□□ -1.65
CD46-213ENST00000471987 KCNH5Q8NCM2 988 aa4.72□□□□□ -1.65
CD46-213ENST00000471987 VPS37AQ8NEZ2 397 aa4.72□□□□□ -1.65
CD46-213ENST00000471987 TRAPPC12Q8WVT3 735 aa4.72□□□□□ -1.65
CD46-213ENST00000471987 PGLYRP2Q96PD5 576 aa4.72□□□□□ -1.65
CD46-213ENST00000471987 CSF3RQ99062 836 aa4.72□□□□□ -1.65
CD46-213ENST00000471987 RRP7AQ9Y3A4 280 aaKnown RBP4.72□□□□□ -1.65
CD46-213ENST00000471987 PCDHGB5Q9Y5G0 923 aa4.72□□□□□ -1.65
CD46-213ENST00000471987 ADGRF5Q8IZF2 1346 aa4.72□□□□□ -1.65
CD46-213ENST00000471987 C17orf113A0A1B0GUU1 675 aa4.71□□□□□ -1.66
CD46-213ENST00000471987 WEE2P0C1S8 567 aa4.71□□□□□ -1.66
CD46-213ENST00000471987 PCNAP12004 261 aa4.71□□□□□ -1.66
CD46-213ENST00000471987 PTPN2P17706 415 aa4.71□□□□□ -1.66
CD46-213ENST00000471987 KCNA5P22460 613 aa4.71□□□□□ -1.66
CD46-213ENST00000471987 GPTP24298 496 aa4.71□□□□□ -1.66
CD46-213ENST00000471987 RUNX2Q13950 521 aa4.71□□□□□ -1.66
CD46-213ENST00000471987 PRKG1Q13976 671 aa4.71□□□□□ -1.66
CD46-213ENST00000471987 SYT16Q17RD7 645 aa4.71□□□□□ -1.66
CD46-213ENST00000471987 ATP13A5Q4VNC0 1218 aa4.71□□□□□ -1.66
CD46-213ENST00000471987 ESCO2Q56NI9 601 aa4.71□□□□□ -1.66
CD46-213ENST00000471987 PPP6R3Q5H9R7 873 aaPredicted RBP4.71□□□□□ -1.66
CD46-213ENST00000471987 IL17RCQ8NAC3 791 aa4.71□□□□□ -1.66
CD46-213ENST00000471987 LNX1Q8TBB1 728 aaPredicted RBP4.71□□□□□ -1.66
CD46-213ENST00000471987 RAB40AQ8WXH6 277 aa4.71□□□□□ -1.66
CD46-213ENST00000471987 CNOT9Q92600 299 aaKnown RBP4.71□□□□□ -1.66
CD46-213ENST00000471987 NOX4Q9NPH5 578 aa4.71□□□□□ -1.66
CD46-213ENST00000471987 RASSF1Q9NS23 344 aa4.71□□□□□ -1.66
CD46-213ENST00000471987 CDC14AQ9UNH5 594 aa4.71□□□□□ -1.66
CD46-213ENST00000471987 DNAJC16Q9Y2G8 782 aa4.71□□□□□ -1.66
CD46-213ENST00000471987 WDR81Q562E7 1941 aa4.71□□□□□ -1.66
CD46-213ENST00000471987 A0A0G2JPF8 293 aa4.7□□□□□ -1.66
CD46-213ENST00000471987 CBY3A6NI87 242 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms