RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 USP28Q96RU2 1077 aa8.29□□□□□ -1.08
LSM2-210ENST00000470086 RANBP9Q96S59 729 aa8.29□□□□□ -1.08
LSM2-210ENST00000470086 RUFY1Q96T51 708 aa8.29□□□□□ -1.08
LSM2-210ENST00000470086 SLC13A1Q9BZW2 595 aa8.29□□□□□ -1.08
LSM2-210ENST00000470086 GPN2Q9H9Y4 310 aaPredicted RBP8.29□□□□□ -1.08
LSM2-210ENST00000470086 FGF22Q9HCT0 170 aa8.29□□□□□ -1.08
LSM2-210ENST00000470086 PRDM8Q9NQV8 689 aa8.29□□□□□ -1.08
LSM2-210ENST00000470086 FKBPLQ9UIM3 349 aa8.29□□□□□ -1.08
LSM2-210ENST00000470086 VPS28Q9UK41 221 aa8.29□□□□□ -1.08
LSM2-210ENST00000470086 TLK1Q9UKI8 766 aa8.29□□□□□ -1.08
LSM2-210ENST00000470086 VANGL2Q9ULK5 521 aa8.29□□□□□ -1.08
LSM2-210ENST00000470086 OR1A2Q9Y585 309 aa8.29□□□□□ -1.08
LSM2-210ENST00000470086 OAS3Q9Y6K5 1087 aaKnown RBP8.29□□□□□ -1.08
LSM2-210ENST00000470086 NIPBLQ6KC79 2804 aaeCLIP8.29□□□□□ -1.08
LSM2-210ENST00000470086 ZGRF1Q86YA3 2104 aa8.29□□□□□ -1.08
LSM2-210ENST00000470086 A0A1B0GTL3 188 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 F5H5T6 163 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 RNF225M0QZC1 329 aaPredicted RBP8.28□□□□□ -1.08
LSM2-210ENST00000470086 AP1G1O43747 822 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 KRT86O43790 486 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 DDAH2O95865 285 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 DLGAP3O95886 979 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 THRAP10827 490 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 ZNF28P17035 718 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 HOXB4P17483 251 aaPredicted RBP8.28□□□□□ -1.08
LSM2-210ENST00000470086 L1CAMP32004 1257 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 NNMTP40261 264 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 RECQLP46063 649 aaPredicted RBP8.28□□□□□ -1.08
LSM2-210ENST00000470086 VAMP7P51809 220 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 CCNHP51946 323 aaPredicted RBP8.28□□□□□ -1.08
LSM2-210ENST00000470086 ARF5P84085 180 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 PPARDQ03181 441 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 SULT2A1Q06520 285 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 NNTQ13423 1086 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 SLC12A1Q13621 1099 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 NR6A1Q15406 480 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 C14orf28Q4W4Y0 310 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 CEP135Q66GS9 1140 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 CNNM4Q6P4Q7 775 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 RD3Q7Z3Z2 195 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 SLC9A9Q8IVB4 645 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 CCDC13Q8IYE1 715 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 ZNF683Q8IZ20 524 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 MMP21Q8N119 569 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 ATP11CQ8NB49 1132 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 PLA2G15Q8NCC3 412 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 GPBAR1Q8TDU6 330 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 KAT5Q92993 513 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 ZSCAN31Q96LW9 406 aaPredicted RBP8.28□□□□□ -1.08
LSM2-210ENST00000470086 TAAR9Q96RI9 348 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 RBM15Q96T37 977 aaKnown RBP eCLIP8.28□□□□□ -1.08
LSM2-210ENST00000470086 TM6SF2Q9BZW4 377 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 ZDHHC6Q9H6R6 413 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 LRIT1Q9P2V4 623 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 HS3ST4Q9Y661 456 aa8.28□□□□□ -1.08
LSM2-210ENST00000470086 SYNJ2BP-COX16A0A087WUM0 186 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 TMEM202A6NGA9 273 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 KCNU1A8MYU2 1149 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 TMX2-CTNND1H3BSU7 103 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 M0QYV0 167 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 AREL1O15033 823 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 MMP20O60882 483 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 ZMPSTE24O75844 475 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 TRUB2O95900 331 aaKnown RBP8.27□□□□□ -1.09
LSM2-210ENST00000470086 BMP15O95972 392 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 PRNPP04156 253 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 SETSIPP0DME0 302 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 CD19P15391 556 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 GLB1P16278 677 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 TFE3P19532 575 aaPredicted RBP8.27□□□□□ -1.09
LSM2-210ENST00000470086 BMP6P22004 513 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 CD1CP29017 333 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 STAT5AP42229 794 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 SNRPFP62306 86 aaKnown RBP8.27□□□□□ -1.09
LSM2-210ENST00000470086 ELOCQ15369 112 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 TESK1Q15569 626 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 KLHL40Q2TBA0 621 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 CBWD6Q4V339 395 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 CBWD3Q5JTY5 395 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 CBWD5Q5RIA9 395 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 SPECC1LQ69YQ0 1117 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 OGFOD3Q6PK18 319 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 ZNF438Q7Z4V0 828 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 BRAPQ7Z569 592 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 ZNF761Q86XN6 746 aaPredicted RBP8.27□□□□□ -1.09
LSM2-210ENST00000470086 NRROSQ86YC3 692 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 FSTL5Q8N475 847 aaPredicted RBP8.27□□□□□ -1.09
LSM2-210ENST00000470086 IRGQQ8WZA9 623 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 TMEM159Q96B96 161 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 TMX3Q96JJ7 454 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 BTN2A3PQ96KV6 586 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 RPRD1AQ96P16 312 aaPredicted RBP8.27□□□□□ -1.09
LSM2-210ENST00000470086 C7orf25Q9BPX7 421 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 WRAP53Q9BUR4 548 aaKnown RBP8.27□□□□□ -1.09
LSM2-210ENST00000470086 DDA1Q9BW61 102 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 SRRTQ9BXP5 876 aaKnown RBP8.27□□□□□ -1.09
LSM2-210ENST00000470086 B3GNT4Q9C0J1 378 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 TMEM168Q9H0V1 697 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 CYP4F12Q9HCS2 524 aa8.27□□□□□ -1.09
LSM2-210ENST00000470086 DYRK4Q9NR20 520 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms