RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 PLPP6Q8IY26 295 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 SRRM1Q8IYB3 904 aaKnown RBP12.13□□□□□ -0.47
LSM2-209ENST00000470083 CCDC13Q8IYE1 715 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 NLGN4XQ8N0W4 816 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 NLGN4YQ8NFZ3 816 aaPredicted RBP12.13□□□□□ -0.47
LSM2-209ENST00000470083 OR7D4Q8NG98 312 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 CPT1CQ8TCG5 803 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 CXorf40AQ8TE69 158 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 STARD8Q92502 1023 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 PDXPQ96GD0 296 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 SLC2A13Q96QE2 648 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 TM6SF2Q9BZW4 377 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 SLC39A1Q9NY26 324 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 MAPK8IP1Q9UQF2 711 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 FCF1Q9Y324 198 aaKnown RBP12.13□□□□□ -0.47
LSM2-209ENST00000470083 KCNMB2Q9Y691 235 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 MED13Q9UHV7 2174 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 LOC101059948A0A1B0GTJ6 334 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 B4E171 279 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 TNFP01375 233 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 GKP32189 559 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 CSTF2P33240 577 aaKnown RBP eCLIP12.12□□□□□ -0.47
LSM2-209ENST00000470083 TSPAN7P41732 249 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 LIMK2P53671 638 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 OR1D5P58170 312 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 NR1D2Q14995 579 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 LRRC14Q15048 493 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 DCAF17Q5H9S7 520 aaPredicted RBP12.12□□□□□ -0.47
LSM2-209ENST00000470083 DCAF12Q5T6F0 453 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 ATP1A1-AS1Q5TC04 95 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 TCERG1LQ5VWI1 586 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 C1QL3Q5VWW1 255 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 KCTD16Q68DU8 428 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 SPECC1LQ69YQ0 1117 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 ZNF783Q6ZMS7 281 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 NYAP1Q6ZVC0 841 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 TFAP2DQ7Z6R9 452 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 ZNF683Q8IZ20 524 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 GUF1Q8N442 669 aaKnown RBP12.12□□□□□ -0.47
LSM2-209ENST00000470083 OR6K2Q8NGY2 324 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 ISG20Q96AZ6 181 aaKnown RBP12.12□□□□□ -0.47
LSM2-209ENST00000470083 WDR92Q96MX6 357 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 ZNF396Q96N95 335 aaPredicted RBP12.12□□□□□ -0.47
LSM2-209ENST00000470083 OSBPL1AQ9BXW6 950 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 SPRY4Q9C004 299 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 INTS2Q9H0H0 1204 aaKnown RBP12.12□□□□□ -0.47
LSM2-209ENST00000470083 SIK2Q9H0K1 926 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 DPEP2Q9H4A9 486 aa12.12□□□□□ -0.47
LSM2-209ENST00000470083 PRRC2CQ9Y520 2896 aaKnown RBP12.11□□□□□ -0.47
LSM2-209ENST00000470083 ILVBLA1L0T0 632 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 ZW10O43264 779 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 RHOBTB3O94955 611 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 UGT2B4P06133 528 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 GLI1P08151 1106 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 TCN2P20062 427 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 ALDH4A1P30038 563 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 OR1E1P30953 314 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 ARF5P84085 180 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 ABHD18Q0P651 414 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 NME3Q13232 169 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 MEA1Q16626 185 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 WSCD2Q2TBF2 565 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 LRRC73Q5JTD7 316 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 DENND1BQ6P3S1 775 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 TTC7BQ86TV6 843 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 IRF2BP1Q8IU81 584 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 UNC5BQ8IZJ1 945 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 DEFB106AQ8N104 65 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 RYBPQ8N488 228 aaPredicted RBP12.11□□□□□ -0.47
LSM2-209ENST00000470083 OR4D9Q8NGE8 314 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 KIAA1524Q8TCG1 905 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 VOPP1Q96AW1 172 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 TEFMQ96QE5 360 aaKnown RBP12.11□□□□□ -0.47
LSM2-209ENST00000470083 SPON2Q9BUD6 331 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 APOOQ9BUR5 198 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 ATP13A1Q9HD20 1204 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 CASS4Q9NQ75 786 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 OR1A2Q9Y585 309 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 HIVEP3Q5T1R4 2406 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 ESPL1Q14674 2120 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 CELSR1Q9NYQ6 3014 aa12.11□□□□□ -0.47
LSM2-209ENST00000470083 CXorf51AA0A1B0GTR3 108 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 WIPF3A6NGB9 483 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 DRGXA6NNA5 263 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 RHPN2P1A8MT19 583 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 KRIT1O00522 736 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 CETN3O15182 167 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 HSF2BPO75031 334 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 CD160O95971 181 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 THRAP10827 490 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 TIMP2P16035 220 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 CD1CP29017 333 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 INPP5AQ14642 412 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 ANKS6Q68DC2 871 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 C16orf46Q6P387 395 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 C17orf82Q86X59 251 aaPredicted RBP12.1□□□□□ -0.47
LSM2-209ENST00000470083 FAM129CQ86XR2 697 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 PPM1KQ8N3J5 372 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 BMPERQ8N8U9 685 aa12.1□□□□□ -0.47
LSM2-209ENST00000470083 OR1E3Q8WZA6 343 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms