RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 ZNF462Q96JM2 2506 aa12.4□□□□□ -0.42
HDAC3-204ENST00000469207 A0A1W2PQM1 296 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 CYSRT1A8MQ03 144 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 RASA4BC9J798 803 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 J3KR12 359 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 NTN3O00634 580 aaPredicted RBP12.39□□□□□ -0.43
HDAC3-204ENST00000469207 RASA4O43374 803 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 GPD1P21695 349 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 EPHB2P29323 1055 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 ETFBP38117 255 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 HK3P52790 923 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 JAM2P57087 298 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 GEMIN4P57678 1058 aaKnown RBP12.39□□□□□ -0.43
HDAC3-204ENST00000469207 RPL7AP62424 266 aaKnown RBP12.39□□□□□ -0.43
HDAC3-204ENST00000469207 CLN3Q13286 438 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 SPIDRQ14159 915 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 INPP5AQ14642 412 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 TGIF1Q15583 401 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 ALG11Q2TAA5 492 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 TMEM52BQ4KMG9 183 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 MACC1Q6ZN28 852 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 ZSWIM9Q86XI8 627 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 ZNF677Q86XU0 584 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 RTL3Q8N8U3 475 aaKnown RBP12.39□□□□□ -0.43
HDAC3-204ENST00000469207 KYQ8NBH2 561 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 PLA2G15Q8NCC3 412 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 TPCN2Q8NHX9 752 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 WDR36Q8NI36 951 aaKnown RBP12.39□□□□□ -0.43
HDAC3-204ENST00000469207 PCDH19Q8TAB3 1148 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 CCDC74AQ96AQ1 378 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 GDAP1L1Q96MZ0 367 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 APOOQ9BUR5 198 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 TMEM51Q9NW97 253 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 ADAM22Q9P0K1 906 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 DOLKQ9UPQ8 538 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 PCDHGA8Q9Y5G5 932 aa12.39□□□□□ -0.43
HDAC3-204ENST00000469207 CXorf51AA0A1B0GTR3 108 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 J3QKU1 62 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 K7ENP7 123 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 CCP110O43303 1012 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 TCEA3O75764 348 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 IGSF6O95976 241 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 C6P13671 934 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 CTSEP14091 401 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 RGRP47804 291 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 RPIAP49247 311 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 LIG3P49916 1009 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 UCNP55089 124 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 RAD51Q06609 339 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 SERINC3Q13530 473 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 LRRC14Q15048 493 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 KRT31Q15323 416 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 INO80DQ53TQ3 878 aaPredicted RBP12.38□□□□□ -0.43
HDAC3-204ENST00000469207 ESRP1Q6NXG1 681 aaKnown RBP12.38□□□□□ -0.43
HDAC3-204ENST00000469207 INO80CQ6PI98 192 aaPredicted RBP12.38□□□□□ -0.43
HDAC3-204ENST00000469207 IGF2-ASQ6U949 168 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 ZSCAN30Q86W11 494 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 CAMK1DQ8IU85 385 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 SDR16C5Q8N3Y7 309 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 ARL14Q8N4G2 192 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 Q8N9G6 341 aaPredicted RBP12.38□□□□□ -0.43
HDAC3-204ENST00000469207 SNRNP27Q8WVK2 155 aaKnown RBP12.38□□□□□ -0.43
HDAC3-204ENST00000469207 GLMNQ92990 594 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 NTAN1Q96AB6 310 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 ARHGEF26Q96DR7 871 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 CELF6Q96J87 481 aaKnown RBP12.38□□□□□ -0.43
HDAC3-204ENST00000469207 NSMCE3Q96MG7 304 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 SELENOOQ9BVL4 669 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 EDEM3Q9BZQ6 932 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 SUV39H2Q9H5I1 410 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 EPB41L5Q9HCM4 733 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 PCDH12Q9NPG4 1184 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 MRPL40Q9NQ50 206 aaKnown RBP12.38□□□□□ -0.43
HDAC3-204ENST00000469207 GPATCH2LQ9NWQ4 482 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 NCKIPSDQ9NZQ3 722 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 ATXN7L1Q9ULK2 861 aaPredicted RBP12.38□□□□□ -0.43
HDAC3-204ENST00000469207 FZD10Q9ULW2 581 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 MFHAS1Q9Y4C4 1052 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 DAAM1Q9Y4D1 1078 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 LRRK1Q38SD2 2015 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 TENM4Q6N022 2769 aa12.38□□□□□ -0.43
HDAC3-204ENST00000469207 FLNBO75369 2602 aaKnown RBP12.38□□□□□ -0.43
HDAC3-204ENST00000469207 CCDC187A0A096LP49 1063 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 TCRBV5S1A1TA0A578 114 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 SIGLEC16A6NMB1 481 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 A8MX80 341 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 RIOK3O14730 519 aaKnown RBP12.37□□□□□ -0.43
HDAC3-204ENST00000469207 NOBOXO60393 691 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 PCCBP05166 539 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 XPAP23025 273 aaPredicted RBP12.37□□□□□ -0.43
HDAC3-204ENST00000469207 EEF1GP26641 437 aaKnown RBP12.37□□□□□ -0.43
HDAC3-204ENST00000469207 SLC5A2P31639 672 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 UGT1A5P35504 534 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 NSFP46459 744 aaKnown RBP12.37□□□□□ -0.43
HDAC3-204ENST00000469207 SRP54P61011 504 aaKnown RBP12.37□□□□□ -0.43
HDAC3-204ENST00000469207 OGDHQ02218 1023 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 UGP2Q16851 508 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 CLEC16AQ2KHT3 1053 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 CCDC81Q6ZN84 652 aa12.37□□□□□ -0.43
HDAC3-204ENST00000469207 CLEC14AQ86T13 490 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms