RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 DENND6BQ8NEG7 585 aa8.64□□□□□ -1.03
SSBP1-208ENST00000469123 OR6K2Q8NGY2 324 aa8.64□□□□□ -1.03
SSBP1-208ENST00000469123 CXorf40AQ8TE69 158 aa8.64□□□□□ -1.03
SSBP1-208ENST00000469123 SNX19Q92543 992 aa8.64□□□□□ -1.03
SSBP1-208ENST00000469123 BIRC7Q96CA5 298 aa8.64□□□□□ -1.03
SSBP1-208ENST00000469123 LRRC45Q96CN5 670 aa8.64□□□□□ -1.03
SSBP1-208ENST00000469123 EXOC2Q96KP1 924 aa8.64□□□□□ -1.03
SSBP1-208ENST00000469123 QKIQ96PU8 341 aaKnown RBP eCLIP8.64□□□□□ -1.03
SSBP1-208ENST00000469123 SRPK1Q96SB4 655 aaKnown RBP8.64□□□□□ -1.03
SSBP1-208ENST00000469123 LGMNQ99538 433 aa8.64□□□□□ -1.03
SSBP1-208ENST00000469123 NT5MQ9NPB1 228 aa8.64□□□□□ -1.03
SSBP1-208ENST00000469123 CD93Q9NPY3 652 aa8.64□□□□□ -1.03
SSBP1-208ENST00000469123 TRHDEQ9UKU6 1024 aa8.64□□□□□ -1.03
SSBP1-208ENST00000469123 SLC6A14Q9UN76 642 aa8.64□□□□□ -1.03
SSBP1-208ENST00000469123 ZKSCAN5Q9Y2L8 839 aa8.64□□□□□ -1.03
SSBP1-208ENST00000469123 ATP8A1Q9Y2Q0 1164 aa8.64□□□□□ -1.03
SSBP1-208ENST00000469123 FADS3Q9Y5Q0 445 aa8.64□□□□□ -1.03
SSBP1-208ENST00000469123 VPS13AQ96RL7 3174 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 FAM47DPA6NHR8 397 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 PRAMEF26H0Y7S4 382 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 H7C0C1 242 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 PSMD11O00231 422 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 TRAFD1O14545 582 aaPredicted RBP8.63□□□□□ -1.03
SSBP1-208ENST00000469123 AREL1O15033 823 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 YKT6O15498 198 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 PCDH8O95206 1070 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 PIGNO95427 931 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 IGHV4-34P06331 123 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 PYGMP11217 842 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 CYP2A6P11509 494 aaPredicted RBP8.63□□□□□ -1.03
SSBP1-208ENST00000469123 HNRNPA2B1P22626 353 aaKnown RBP8.63□□□□□ -1.03
SSBP1-208ENST00000469123 AKT2P31751 481 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 RGRP47804 291 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 ATP5OP48047 213 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 LIMK1P53667 647 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 TAS2R38P59533 333 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 ITKQ08881 620 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 SPEM2Q0P670 501 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 SGCGQ13326 291 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 POM121L1PQ3SYA9 428 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 TMEM52BQ4KMG9 183 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 TRIM61Q5EBN2 209 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 ITPRIPL1Q6GPH6 555 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 NAPEPLDQ6IQ20 393 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 USP45Q70EL2 814 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 ARMCX6Q7L4S7 300 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 ALYREFQ86V81 257 aaKnown RBP8.63□□□□□ -1.03
SSBP1-208ENST00000469123 DCP2Q8IU60 420 aaKnown RBP8.63□□□□□ -1.03
SSBP1-208ENST00000469123 OXR1Q8N573 874 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 NETO1Q8TDF5 533 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 HTR3CQ8WXA8 447 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 LENG8Q96PV6 779 aaPredicted RBP8.63□□□□□ -1.03
SSBP1-208ENST00000469123 NAP1L3Q99457 506 aaPredicted RBP8.63□□□□□ -1.03
SSBP1-208ENST00000469123 SEMA3CQ99985 751 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 ADGRE3Q9BY15 652 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 SLC25A51Q9H1U9 297 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 NOD2Q9HC29 1040 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 CAPN10Q9HC96 672 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 HOMER3Q9NSC5 361 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 PHTF1Q9UMS5 762 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 CNOT1A5YKK6 2376 aaKnown RBP8.63□□□□□ -1.03
SSBP1-208ENST00000469123 DOCK9Q9BZ29 2069 aa8.63□□□□□ -1.03
SSBP1-208ENST00000469123 A0A0U1RQJ8 604 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 A0A1W2PQU0 124 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 GOLGA6CA6NDK9 693 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 GOLGA6BA6NDN3 693 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 KCNK1O00180 336 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 RIOK3O14730 519 aaKnown RBP8.62□□□□□ -1.03
SSBP1-208ENST00000469123 MUSKO15146 869 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 VILLO15195 856 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 OPHN1O60890 802 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 PGLSO95336 258 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 MAP3K6O95382 1288 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 CER1O95813 267 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 CPP00450 1065 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 JCHAINP01591 159 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 CFIP05156 583 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 HLA-DQB2P05538 268 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 GOLGA6DP0CG33 693 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 TIMP2P16035 220 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 PECAM1P16284 738 aaPredicted RBP8.62□□□□□ -1.03
SSBP1-208ENST00000469123 ZNF30P17039 623 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 PTPN3P26045 913 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 GKP32189 559 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 MMP12P39900 470 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 METAP1P53582 386 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 ATXN3P54252 364 aaPredicted RBP8.62□□□□□ -1.03
SSBP1-208ENST00000469123 EPHB1P54762 984 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 EIF3EP60228 445 aaKnown RBP8.62□□□□□ -1.03
SSBP1-208ENST00000469123 OTUD4Q01804 1114 aaKnown RBP8.62□□□□□ -1.03
SSBP1-208ENST00000469123 KLF1Q13351 362 aaPredicted RBP8.62□□□□□ -1.03
SSBP1-208ENST00000469123 AGERQ15109 404 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 ZNF284Q2VY69 593 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 AASDHQ4L235 1098 aaPredicted RBP8.62□□□□□ -1.03
SSBP1-208ENST00000469123 TMEM259Q4ZIN3 620 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 CCDC70Q6NSX1 233 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 NPNTQ6UXI9 565 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 DPPA4Q7L190 304 aa8.62□□□□□ -1.03
SSBP1-208ENST00000469123 ADAT2Q7Z6V5 191 aaKnown RBP8.62□□□□□ -1.03
SSBP1-208ENST00000469123 ZC3H18Q86VM9 953 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms