RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 HADHAP40939 763 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 GNAQP50148 359 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 HDAC4P56524 1084 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 CEBPZQ03701 1054 aaKnown RBP5.33□□□□□ -1.56
LSM5-209ENST00000468872 VEPH1Q14D04 833 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 ALG11Q2TAA5 492 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 C6orf10Q5SRN2 563 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 TTI2Q6NXR4 508 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 FAM83HQ6ZRV2 1179 aaPredicted RBP5.33□□□□□ -1.56
LSM5-209ENST00000468872 TBC1D26Q86UD7 250 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 GPSM1Q86YR5 675 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 DHX40Q8IX18 779 aaKnown RBP5.33□□□□□ -1.56
LSM5-209ENST00000468872 KIAA2013Q8IYS2 634 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 FAM185AQ8N0U4 392 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 TTC39CQ8N584 583 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 PDILTQ8N807 584 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 KDM1BQ8NB78 822 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 NSMCE1Q8WV22 266 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 PABPC5Q96DU9 382 aaKnown RBP5.33□□□□□ -1.56
LSM5-209ENST00000468872 WDFY2Q96P53 400 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 STRA6Q9BX79 667 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 HCFC1R1Q9NWW0 138 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 NSMCE4AQ9NXX6 385 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 MSRB1Q9NZV6 116 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 SEL1LQ9UBV2 794 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 VPS28Q9UK41 221 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 ADAM18Q9Y3Q7 739 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 LYVE1Q9Y5Y7 322 aa5.33□□□□□ -1.56
LSM5-209ENST00000468872 ARAP1Q96P48 1450 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 A0A096LPK6 155 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 FAM237BA0A1B0GVD1 139 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 LRRC53A6NM62 1247 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 HSPB6O14558 160 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 AHCYL1O43865 530 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 KIF1CO43896 1103 aaKnown RBP5.32□□□□□ -1.56
LSM5-209ENST00000468872 PAGE4O60829 102 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 TFP02787 698 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 EIF2S1P05198 315 aaKnown RBP5.32□□□□□ -1.56
LSM5-209ENST00000468872 CHRNB1P11230 501 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 ALOX12P18054 663 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 GPR12P47775 334 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 CXCR3P49682 368 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 TMPRSS3P57727 454 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 KCTD2Q14681 263 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 LRRC8EQ6NSJ5 796 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 TMEM71Q6P5X7 295 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 NCEH1Q6PIU2 408 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 ANKRD13BQ86YJ7 626 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 TDRPQ86YL5 185 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 TMC8Q8IU68 726 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 ZDHHC17Q8IUH5 632 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 LURAP1LQ8IV03 231 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 ZDHHC23Q8IYP9 409 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 WDTC1Q8N5D0 677 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 HORMAD2Q8N7B1 307 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 FRMD1Q8N878 549 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 SLC44A5Q8NCS7 719 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 PSPC1Q8WXF1 523 aaKnown RBP5.32□□□□□ -1.56
LSM5-209ENST00000468872 FAM149B1Q96BN6 582 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 MAP7D2Q96T17 732 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 H2AFJQ9BTM1 129 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 B3GNT4Q9C0J1 378 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 PLEKHA4Q9H4M7 779 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 PRKRIP1Q9H875 184 aaPredicted RBP5.32□□□□□ -1.56
LSM5-209ENST00000468872 POLR1BQ9H9Y6 1135 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 SPATS2LQ9NUQ6 558 aaKnown RBP5.32□□□□□ -1.56
LSM5-209ENST00000468872 HEY2Q9UBP5 337 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 CACNA1IQ9P0X4 2223 aa5.32□□□□□ -1.56
LSM5-209ENST00000468872 RSF1Q96T23 1441 aaPredicted RBP5.31□□□□□ -1.56
LSM5-209ENST00000468872 THOC2Q8NI27 1593 aaKnown RBP5.31□□□□□ -1.56
LSM5-209ENST00000468872 HSPB2A8KAH6 182 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 AGAP14A8MT82 685 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 ZNF814B7Z6K7 855 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 KLRF2D3W0D1 207 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 EIF5BO60841 1220 aaKnown RBP5.31□□□□□ -1.56
LSM5-209ENST00000468872 IRF1P10914 325 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 RARGP13631 454 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 SRD5A1P18405 259 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 SCP2P22307 547 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 RFC1P35251 1148 aaPredicted RBP5.31□□□□□ -1.56
LSM5-209ENST00000468872 GABRB2P47870 512 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 CLCN5P51795 746 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 GAD2Q05329 585 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 GRIK3Q13003 919 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 RUNX2Q13950 521 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 FRG1Q14331 258 aaKnown RBP5.31□□□□□ -1.56
LSM5-209ENST00000468872 PPP2R5BQ15173 497 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 HSPB2Q16082 182 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 HIST2H2ACQ16777 129 aaPredicted RBP5.31□□□□□ -1.56
LSM5-209ENST00000468872 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.31□□□□□ -1.56
LSM5-209ENST00000468872 FAM217AQ8IXS0 508 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 CCDC105Q8IYK2 499 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 CCDC89Q8N998 374 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 MCPH1Q8NEM0 835 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 ARHGEF2Q92974 986 aaKnown RBP5.31□□□□□ -1.56
LSM5-209ENST00000468872 GTF3C6Q969F1 213 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 SMARCE1Q969G3 411 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 NSUN4Q96CB9 384 aaKnown RBP5.31□□□□□ -1.56
LSM5-209ENST00000468872 BBS4Q96RK4 519 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 YME1L1Q96TA2 773 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms