RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 ARID1BQ8NFD5 2236 aaPredicted RBP3.57□□□□□ -1.84
TRIM59-202ENST00000468542 CYB5D2Q8WUJ1 264 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 MAIP1Q8WWC4 291 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 KRT35Q92764 455 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 NKD2Q969F2 451 aaPredicted RBP3.57□□□□□ -1.84
TRIM59-202ENST00000468542 RAB7BQ96AH8 199 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 VOPP1Q96AW1 172 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 HAUS1Q96CS2 278 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 ECHDC3Q96DC8 303 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 RTP4Q96DX8 246 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 SIPA1Q96FS4 1042 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 PBKQ96KB5 322 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 RPL10LQ96L21 214 aaKnown RBP3.57□□□□□ -1.84
TRIM59-202ENST00000468542 PCDH15Q96QU1 1955 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 NUDCD1Q96RS6 583 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 FAM129BQ96TA1 746 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 NAP1L3Q99457 506 aaPredicted RBP3.57□□□□□ -1.84
TRIM59-202ENST00000468542 IL12RB2Q99665 862 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 C19orf43Q9BQ61 176 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 HEPHQ9BQS7 1158 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 CINPQ9BW66 212 aaPredicted RBP3.57□□□□□ -1.84
TRIM59-202ENST00000468542 TLR10Q9BXR5 811 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 HDAC8Q9BY41 377 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 MAGEB5Q9BZ81 275 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 OSBPL8Q9BZF1 889 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 SLC39A8Q9C0K1 460 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 POLR1EQ9GZS1 481 aaKnown RBP3.57□□□□□ -1.84
TRIM59-202ENST00000468542 DUSP15Q9H1R2 295 aaPredicted RBP3.57□□□□□ -1.84
TRIM59-202ENST00000468542 ZNF106Q9H2Y7 1883 aaKnown RBP3.57□□□□□ -1.84
TRIM59-202ENST00000468542 PABPC3Q9H361 631 aaKnown RBP3.57□□□□□ -1.84
TRIM59-202ENST00000468542 GOLPH3Q9H4A6 298 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 SGK2Q9HBY8 427 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 PREBQ9HCU5 417 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 ZDHHC4Q9NPG8 344 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 LZTFL1Q9NQ48 299 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 VPS45Q9NRW7 570 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 HOMER3Q9NSC5 361 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 ETNK2Q9NVF9 386 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 C2orf42Q9NWW7 574 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 RNF14Q9UBS8 474 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 TRIM10Q9UDY6 481 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 IL36AQ9UHA7 158 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 TRHDEQ9UKU6 1024 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 DNPEPQ9ULA0 475 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 RPL26L1Q9UNX3 145 aaKnown RBP3.57□□□□□ -1.84
TRIM59-202ENST00000468542 TFR2Q9UP52 801 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 SCN8AQ9UQD0 1980 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 CABIN1Q9Y6J0 2220 aa3.57□□□□□ -1.84
TRIM59-202ENST00000468542 CNOT1A5YKK6 2376 aaKnown RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 IGHV1OR15-9A0A0B4J2B8 117 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 A0A0U1RQJ8 604 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 BCLAF3A2AJT9 711 aaKnown RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 LRRC72A6NJI9 287 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 ERI2A8K979 691 aaKnown RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 H0Y858 1186 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 J3KR12 359 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 K7ERQ8 282 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 DFFAO00273 331 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 TRAFD1O14545 582 aaPredicted RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 TOR1BO14657 336 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 AREL1O15033 823 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 HTRA2O43464 458 aaPredicted RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 SMAD6O43541 496 aaKnown RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 LATO43561 262 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 TSPAN6O43657 245 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 PLRG1O43660 514 aaKnown RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 OPHN1O60890 802 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 RNGTTO60942 597 aaKnown RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 RPP40O75818 363 aaKnown RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 STK10O94804 968 aaKnown RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 RHOBTB1O94844 696 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 FTCDO95954 541 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 ITGAVP06756 1048 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 SERPINF2P08697 491 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 ACADMP11310 421 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 KRT10P13645 584 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 HLA-EP13747 358 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 CA4P22748 312 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 GLDCP23378 1020 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 SERPINA4P29622 427 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 DRD3P35462 400 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 GJC1P36383 396 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 MMP13P45452 471 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 MARCKSL1P49006 195 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 CCR5P51681 352 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 NEK3P51956 506 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 RPS14P62263 151 aaKnown RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 CREB5Q02930 508 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 LMNB2Q03252 620 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 SLC10A7Q0GE19 358 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 ELP6Q0PNE2 266 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 OVGP1Q12889 678 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 SLC10A2Q12908 348 aaPredicted RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 CYTH1Q15438 398 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 CCNG2Q16589 344 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 PLK5Q496M5 336 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 ACCSLQ4AC99 568 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 TEX44Q53QW1 395 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 SLC45A4Q5BKX6 768 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 SEL1L2Q5TEA6 688 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms