RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 ARHGAP12Q8IWW6 846 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 PCDH20Q8N6Y1 951 aaKnown RBP15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 DQX1Q8TE96 717 aaKnown RBP15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 PRICKLE1Q96MT3 831 aaPredicted RBP15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 MRPL1Q9BYD6 325 aaKnown RBP15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 OSBPL2Q9H1P3 480 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 ATXN3LQ9H3M9 355 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 CHST12Q9NRB3 414 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 APPL1Q9UKG1 709 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 TRPV2Q9Y5S1 764 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 A0A087X1B8 175 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 TRIM38O00635 465 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 CHRNA1P02708 482 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 TFAP2AP05549 437 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 ATP5F1P24539 256 aaPredicted RBP15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 GEMP55040 296 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 SEPT6Q14141 434 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 C6orf52Q5T4I8 152 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 POTEHQ6S545 545 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 SPNS2Q8IVW8 549 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 C2CD4AQ8NCU7 369 aaPredicted RBP15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 DGCR14Q96DF8 476 aaKnown RBP15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 IL12RB2Q99665 862 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 TRPV6Q9H1D0 765 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 FAM105AQ9NUU6 356 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 SLC38A7Q9NVC3 462 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 RHBDL2Q9NX52 303 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 MIOSQ9NXC5 875 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 FBXO5Q9UKT4 447 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 PAMP19021 973 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 FLT3LGP49771 235 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 PSME3P61289 254 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 CDKL1Q00532 357 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 CSHL1Q14406 222 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 ACBD5Q5T8D3 534 aaPredicted RBP15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 RNF135Q8IUD6 432 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 C3orf58Q8NDZ4 430 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 FSD1LQ9BXM9 530 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 SLC39A8Q9C0K1 460 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 CYP4F12Q9HCS2 524 aa15.92■□□□□ 0.14
TSPAN4-211ENST00000468468 MAFKO60675 156 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 RNASEH2AO75792 299 aaKnown RBP15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 HSPA1AP0DMV8 641 aaKnown RBP15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 HSPA1BP0DMV9 641 aaKnown RBP15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 KPNA2P52292 529 aaKnown RBP15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 DNAJB13P59910 316 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 EML3Q32P44 896 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 IYDQ6PHW0 289 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 PELI3Q8N2H9 469 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 MYLPFQ96A32 169 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 AGO3Q9H9G7 860 aaKnown RBP15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 EPS15L1Q9UBC2 864 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 NEU3Q9UQ49 428 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 AURKAO14965 403 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 MATN3O15232 486 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 TNFAIP8O95379 198 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 THP07101 528 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 ARSAP15289 507 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 BDNFP23560 247 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 ADRA1AP35348 466 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 CHRNA4P43681 627 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 INHBCP55103 352 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 MYBPC1Q00872 1141 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 CAP1Q01518 475 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 POU4F1Q01851 419 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 SULT2A1Q06520 285 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 PDAP1Q13442 181 aaKnown RBP15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 RBM20Q5T481 1227 aaKnown RBP15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 RBM44Q6ZP01 1051 aaKnown RBP15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 TMEM102Q8N9M5 508 aaPredicted RBP15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 SPPL2BQ8TCT7 592 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 IRGQQ8WZA9 623 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 CSNK1G1Q9HCP0 422 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 ENTPD7Q9NQZ7 604 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 IGSF5Q9NSI5 407 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 PCDHGA7Q9Y5G6 932 aa15.91■□□□□ 0.14
TSPAN4-211ENST00000468468 HLA-DQB2P05538 268 aa15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 CPB1P15086 417 aa15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 ATP6V1B1P15313 513 aa15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 IL23RQ5VWK5 629 aa15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 RPS27LQ71UM5 84 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 AHI1Q8N157 1196 aa15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 PTCD2Q8WV60 388 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 ATP6V1E2Q96A05 226 aa15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 TRPC7Q9HCX4 862 aa15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 TREX1Q9NSU2 369 aa15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 RBM22Q9NW64 420 aaKnown RBP eCLIP15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 ARHGEF38Q9NXL2 777 aa15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 UTP6Q9NYH9 597 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 PCSK1P29120 753 aa15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 HSPA13P48723 471 aa15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 SREBF2Q12772 1141 aa15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 STX5Q13190 355 aa15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 MFSD14CQ5VZR4 134 aa15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 NEPROQ6NW34 567 aa15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 CCDC117Q8IWD4 279 aaPredicted RBP15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 ASB9Q96DX5 294 aa15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 PRPF18Q99633 342 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 PAAF1Q9BRP4 392 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms