RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 KIAA1468Q9P260 1216 aa13.23□□□□□ -0.29
PTPN7-207ENST00000468385 HPCAL4Q9UM19 191 aa13.23□□□□□ -0.29
PTPN7-207ENST00000468385 DOLKQ9UPQ8 538 aa13.23□□□□□ -0.29
PTPN7-207ENST00000468385 TMX2-CTNND1H3BSU7 103 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 TMCC1O94876 653 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 RPLP0P05388 317 aaKnown RBP13.22□□□□□ -0.29
PTPN7-207ENST00000468385 MMEP08473 750 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 ALPIP09923 528 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 CCKBRP32239 447 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 INHBCP55103 352 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 NFATC3Q12968 1075 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 TCEA2Q15560 299 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 CCDC14Q49A88 953 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 TMEM52BQ4KMG9 183 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 VWA3BQ502W6 1294 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 MIIPQ5JXC2 388 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 KLHDC7AQ5VTJ3 777 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 NAA35Q5VZE5 725 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 PRICKLE2Q7Z3G6 844 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 HID1Q8IV36 788 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 MSANTD4Q8NCY6 345 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 RXFP2Q8WXD0 754 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 SCG3Q8WXD2 468 aaKnown RBP13.22□□□□□ -0.29
PTPN7-207ENST00000468385 TBC1D31Q96DN5 1066 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 GDAP1L1Q96MZ0 367 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 CPEB1Q9BZB8 566 aaKnown RBP13.22□□□□□ -0.29
PTPN7-207ENST00000468385 STRADBQ9C0K7 418 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 NDST4Q9H3R1 872 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 LRRN3Q9H3W5 708 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 NOL6Q9H6R4 1146 aaKnown RBP13.22□□□□□ -0.29
PTPN7-207ENST00000468385 WDR70Q9NW82 654 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 DKK3Q9UBP4 350 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 COQ6Q9Y2Z9 468 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 MFHAS1Q9Y4C4 1052 aa13.22□□□□□ -0.29
PTPN7-207ENST00000468385 ZSCAN5CA6NGD5 496 aaPredicted RBP13.21□□□□□ -0.29
PTPN7-207ENST00000468385 TMEM110-MUSTN1A8MSY1 372 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 INSIG1O15503 277 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 BUB1O43683 1085 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 RASGRP1O95267 797 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 GJB6O95452 261 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 IGSF6O95976 241 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 CTSEP14091 401 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 ITGB6P18564 788 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 CSRP3P50461 194 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 RAD51Q06609 339 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 NFATC4Q14934 902 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 LRRC14Q15048 493 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 WSCD2Q2TBF2 565 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 KCTD16Q68DU8 428 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 ENPP7Q6UWV6 458 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 STRADAQ7RTN6 431 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 PHLDB2Q86SQ0 1253 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 GKN2Q86XP6 184 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 JAMLQ86YT9 394 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 CCDC185Q8N715 623 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 JOSD2Q8TAC2 188 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 GPT2Q8TD30 523 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 EPS8L1Q8TE68 723 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 CASKIN2Q8WXE0 1202 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 EXTL1Q92935 676 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 SGF29Q96ES7 293 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 TMEM74Q96NL1 305 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 APOOQ9BUR5 198 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 FAM117AQ9C073 453 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 KLC2Q9H0B6 622 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 PISDQ9UG56 409 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 GPR34Q9UPC5 381 aa13.21□□□□□ -0.29
PTPN7-207ENST00000468385 LRP4O75096 1905 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 PIEZO2Q9H5I5 2752 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 C2CD4BA6NLJ0 364 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 NVLO15381 856 aaKnown RBP13.2□□□□□ -0.3
PTPN7-207ENST00000468385 PIGNO95427 931 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 CYP1A1P04798 512 aaPredicted RBP13.2□□□□□ -0.3
PTPN7-207ENST00000468385 PLEKP08567 350 aaPredicted RBP13.2□□□□□ -0.3
PTPN7-207ENST00000468385 LIPCP11150 499 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 UCHL3P15374 230 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 ITIH1P19827 911 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 SDC4P31431 198 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 HDAC4P56524 1084 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 SRP54P61011 504 aaKnown RBP13.2□□□□□ -0.3
PTPN7-207ENST00000468385 RHOAP61586 193 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 ELP6Q0PNE2 266 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 CAMK4Q16566 473 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 INO80DQ53TQ3 878 aaPredicted RBP13.2□□□□□ -0.3
PTPN7-207ENST00000468385 XKR5Q6UX68 686 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 USP53Q70EK8 1073 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 RD3Q7Z3Z2 195 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 GPR156Q8NFN8 814 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 OR6C4Q8NGE1 309 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 CENPIQ92674 756 aaPredicted RBP13.2□□□□□ -0.3
PTPN7-207ENST00000468385 TUBGCP2Q9BSJ2 902 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 TRIM4Q9C037 500 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 STARD5Q9NSY2 213 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 IL17BQ9UHF5 180 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 LOXL2Q9Y4K0 774 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 OR1A2Q9Y585 309 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 HEMK1Q9Y5R4 338 aaPredicted RBP13.2□□□□□ -0.3
PTPN7-207ENST00000468385 SCN8AQ9UQD0 1980 aa13.2□□□□□ -0.3
PTPN7-207ENST00000468385 TSPAN11A1L157 253 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 F8VZ95 297 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms