RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 ATP13A3Q9H7F0 1226 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 UCKL1Q9NWZ5 548 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 TOR4AQ9NXH8 423 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 FTSJ1Q9UET6 329 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 TFR2Q9UP52 801 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 PCDHGC4Q9Y5F7 938 aa11.65□□□□□ -0.54
CDHR3-205ENST00000468143 ASCC3Q8N3C0 2202 aaKnown RBP11.65□□□□□ -0.54
CDHR3-205ENST00000468143 TSPAN11A1L157 253 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 C1QTNF9BB2RNN3 333 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 RIOK3O14730 519 aaKnown RBP11.64□□□□□ -0.55
CDHR3-205ENST00000468143 YKT6O15498 198 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 TNFSF14O43557 240 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 TRIM16O95361 564 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 KRT7P08729 469 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 C1QTNF9P0C862 333 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 KDELR1P24390 212 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 SERPINB6P35237 376 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 MAGEA1P43355 309 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 RENBPP51606 427 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 ITKQ08881 620 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 DNAJC3Q13217 504 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 PDE1CQ14123 709 aaPredicted RBP11.64□□□□□ -0.55
CDHR3-205ENST00000468143 FZD2Q14332 565 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 PDK2Q15119 407 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 INAVAQ3KP66 663 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 FAM182AQ5T1J6 154 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 MARC1Q5VT66 337 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 ERAP2Q6P179 960 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 KYAT3Q6YP21 454 aaKnown RBP11.64□□□□□ -0.55
CDHR3-205ENST00000468143 KANSL1Q7Z3B3 1105 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 RAB44Q7Z6P3 723 aaPredicted RBP11.64□□□□□ -0.55
CDHR3-205ENST00000468143 MARCH9Q86YJ5 346 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 MAP7D3Q8IWC1 876 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 RHOT2Q8IXI1 618 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 SLC25A45Q8N413 288 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 PQLC3Q8N755 202 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 PDCD6IPQ8WUM4 868 aaKnown RBP11.64□□□□□ -0.55
CDHR3-205ENST00000468143 NSMCE1Q8WV22 266 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 ASB12Q8WXK4 309 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 ADAMTS14Q8WXS8 1223 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 CNDP2Q96KP4 475 aaKnown RBP11.64□□□□□ -0.55
CDHR3-205ENST00000468143 NOD2Q9HC29 1040 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 SCUBE2Q9NQ36 999 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 DNAJC28Q9NX36 388 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 RCOR3Q9P2K3 495 aaPredicted RBP11.64□□□□□ -0.55
CDHR3-205ENST00000468143 CHD5Q8TDI0 1954 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 NCOR2Q9Y618 2525 aa11.64□□□□□ -0.55
CDHR3-205ENST00000468143 LRRD1A4D1F6 860 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 TRAFD1O14545 582 aaPredicted RBP11.63□□□□□ -0.55
CDHR3-205ENST00000468143 ENC1O14682 589 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 FFAR2O15552 330 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 LZTS3O60299 673 aaPredicted RBP11.63□□□□□ -0.55
CDHR3-205ENST00000468143 C6P13671 934 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 DGKAP23743 735 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 MAN1A1P33908 653 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 IGFALSP35858 605 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 ARHGAP25P42331 645 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 MMP13P45452 471 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 NOP2P46087 812 aaKnown RBP11.63□□□□□ -0.55
CDHR3-205ENST00000468143 RABIFP47224 123 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 LIG3P49916 1009 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 PFN3P60673 137 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 AP1S1P61966 158 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 GBE1Q04446 702 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 ELP6Q0PNE2 266 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 SLC10A2Q12908 348 aaPredicted RBP11.63□□□□□ -0.55
CDHR3-205ENST00000468143 PAFAH1B3Q15102 231 aaKnown RBP11.63□□□□□ -0.55
CDHR3-205ENST00000468143 PTPRRQ15256 657 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 BRAT1Q6PJG6 821 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 ZSCAN30Q86W11 494 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 BBS5Q8N3I7 341 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 TP53I13Q8NBR0 393 aaPredicted RBP11.63□□□□□ -0.55
CDHR3-205ENST00000468143 RFFLQ8WZ73 363 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 RNF25Q96BH1 459 aaPredicted RBP11.63□□□□□ -0.55
CDHR3-205ENST00000468143 RNF157Q96PX1 679 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 NUDCD1Q96RS6 583 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 ZNF670Q9BS34 389 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 NT5MQ9NPB1 228 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 LCMT1Q9UIC8 334 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 KLF15Q9UIH9 416 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 ATP8A1Q9Y2Q0 1164 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 SPTBN2O15020 2390 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 TMEM131Q92545 1883 aa11.63□□□□□ -0.55
CDHR3-205ENST00000468143 SPTY2D1-AS1A0A0U1RR47 76 aa11.62□□□□□ -0.55
CDHR3-205ENST00000468143 TRIM38O00635 465 aa11.62□□□□□ -0.55
CDHR3-205ENST00000468143 SIGLEC6O43699 453 aa11.62□□□□□ -0.55
CDHR3-205ENST00000468143 PIAS2O75928 621 aa11.62□□□□□ -0.55
CDHR3-205ENST00000468143 NEBLO76041 1014 aa11.62□□□□□ -0.55
CDHR3-205ENST00000468143 MTA2O94776 668 aa11.62□□□□□ -0.55
CDHR3-205ENST00000468143 KRT1P04264 644 aa11.62□□□□□ -0.55
CDHR3-205ENST00000468143 MYF5P13349 255 aa11.62□□□□□ -0.55
CDHR3-205ENST00000468143 CR2P20023 1033 aa11.62□□□□□ -0.55
CDHR3-205ENST00000468143 COMTP21964 271 aa11.62□□□□□ -0.55
CDHR3-205ENST00000468143 GARSP41250 739 aaKnown RBP11.62□□□□□ -0.55
CDHR3-205ENST00000468143 SUOXP51687 545 aa11.62□□□□□ -0.55
CDHR3-205ENST00000468143 CLDN6P56747 220 aa11.62□□□□□ -0.55
CDHR3-205ENST00000468143 GALNT2Q10471 571 aa11.62□□□□□ -0.55
CDHR3-205ENST00000468143 TRAF2Q12933 501 aa11.62□□□□□ -0.55
CDHR3-205ENST00000468143 LRRC14Q15048 493 aa11.62□□□□□ -0.55
CDHR3-205ENST00000468143 IRF4Q15306 451 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms