RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 XKR4Q5GH76 650 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 ABHD17BQ5VST6 288 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 PGM2L1Q6PCE3 622 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 KCNK18Q7Z418 384 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 DNAJB7Q7Z6W7 309 aaPredicted RBP4.43□□□□□ -1.7
SSR3-204ENST00000467733 GALNT15Q8N3T1 639 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 SIMC1Q8NDZ2 872 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 GPR156Q8NFN8 814 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 TSPEARQ8WU66 669 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 RLN3Q8WXF3 142 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 USP13Q92995 863 aaPredicted RBP4.43□□□□□ -1.7
SSR3-204ENST00000467733 ATP2A3Q93084 1043 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 CCDC43Q96MW1 224 aaKnown RBP4.43□□□□□ -1.7
SSR3-204ENST00000467733 PGLYRP2Q96PD5 576 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 BRINP2Q9C0B6 783 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 SH3GLB2Q9NR46 395 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 ANKEF1Q9NU02 776 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 MKS1Q9NXB0 559 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 RGL1Q9NZL6 768 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 VPS54Q9P1Q0 977 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 HSFX1Q9UBD0 423 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 DKK2Q9UBU2 259 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 CCL26Q9Y258 94 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 FRMD4BQ9Y2L6 1034 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 GPR45Q9Y5Y3 372 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 BSNQ9UPA5 3926 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 LRBAP50851 2863 aa4.43□□□□□ -1.7
SSR3-204ENST00000467733 RELNP78509 3460 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 NBPF19A0A087WUL8 3843 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 ITPR3Q14573 2671 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 K7EQS6 105 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 M0QZQ0 153 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 ACKR2O00590 384 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 USO1O60763 962 aaKnown RBP4.42□□□□□ -1.7
SSR3-204ENST00000467733 SOAT2O75908 522 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 OAZ2O95190 189 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 OR4Q2P0C623 313 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 ZNF883P0CG24 379 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 OSMP13725 252 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 HLA-EP13747 358 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 KCNE1P15382 129 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 GCFC2P16383 781 aaKnown RBP4.42□□□□□ -1.7
SSR3-204ENST00000467733 ATF6P18850 670 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 AGXTP21549 392 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 AVPR1AP37288 418 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 IFNAR2P48551 515 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 AARSP49588 968 aaKnown RBP eCLIP4.42□□□□□ -1.7
SSR3-204ENST00000467733 RARRES1P49788 294 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 CDKN1CP49918 316 aaPredicted RBP4.42□□□□□ -1.7
SSR3-204ENST00000467733 EXOSC10Q01780 885 aaKnown RBP4.42□□□□□ -1.7
SSR3-204ENST00000467733 AKAP17AQ02040 695 aaKnown RBP4.42□□□□□ -1.7
SSR3-204ENST00000467733 APBA1Q02410 837 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 YWHAHQ04917 246 aaPredicted RBP4.42□□□□□ -1.7
SSR3-204ENST00000467733 GRIK2Q13002 908 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 MALLQ13021 153 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 GPR17Q13304 367 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 CTTNQ14247 550 aaKnown RBP4.42□□□□□ -1.7
SSR3-204ENST00000467733 MYBPC2Q14324 1141 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 MTF1Q14872 753 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 VEPH1Q14D04 833 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 ZNF77Q15935 545 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 MST1LQ2TV78 715 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 NCAPH2Q6IBW4 605 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 CENPPQ6IPU0 288 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 ARMC6Q6NXE6 501 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 ALKAL1Q6UXT8 129 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 SLC36A4Q6YBV0 504 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 TTC30AQ86WT1 665 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 TPH2Q8IWU9 490 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 FAM177A1Q8N128 213 aaPredicted RBP4.42□□□□□ -1.7
SSR3-204ENST00000467733 CCDC33Q8N5R6 958 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 FRMD1Q8N878 549 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 MAB21L3Q8N8X9 362 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 FAM98AQ8NCA5 519 aaKnown RBP4.42□□□□□ -1.7
SSR3-204ENST00000467733 CPEB3Q8NE35 698 aaKnown RBP4.42□□□□□ -1.7
SSR3-204ENST00000467733 MCPH1Q8NEM0 835 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 OSCP1Q8WVF1 389 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 HMGB4Q8WW32 186 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 NXPE2Q96DL1 559 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 TCEANC2Q96MN5 208 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 ZMAT2Q96NC0 199 aaKnown RBP4.42□□□□□ -1.7
SSR3-204ENST00000467733 CCDC94Q9BW85 323 aaPredicted RBP4.42□□□□□ -1.7
SSR3-204ENST00000467733 RNF26Q9BY78 433 aaPredicted RBP4.42□□□□□ -1.7
SSR3-204ENST00000467733 LSG1Q9H089 658 aaKnown RBP4.42□□□□□ -1.7
SSR3-204ENST00000467733 ECT2Q9H8V3 914 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 TDP1Q9NUW8 608 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 BCCIPQ9P287 314 aaKnown RBP eCLIP4.42□□□□□ -1.7
SSR3-204ENST00000467733 NUMA1Q14980 2115 aa4.42□□□□□ -1.7
SSR3-204ENST00000467733 TCRBV21S2A2A0A5A6 115 aa4.41□□□□□ -1.7
SSR3-204ENST00000467733 FAM171A2A8MVW0 826 aa4.41□□□□□ -1.7
SSR3-204ENST00000467733 B5MCH6 92 aa4.41□□□□□ -1.7
SSR3-204ENST00000467733 PYCARD-AS1I3L0S3 204 aa4.41□□□□□ -1.7
SSR3-204ENST00000467733 SGK1O00141 431 aa4.41□□□□□ -1.7
SSR3-204ENST00000467733 FLRT2O43155 660 aa4.41□□□□□ -1.7
SSR3-204ENST00000467733 RRP8O43159 456 aaKnown RBP4.41□□□□□ -1.7
SSR3-204ENST00000467733 TLX3O43711 291 aaPredicted RBP4.41□□□□□ -1.7
SSR3-204ENST00000467733 ENDOD1O94919 500 aa4.41□□□□□ -1.7
SSR3-204ENST00000467733 SLITRK3O94933 977 aa4.41□□□□□ -1.7
SSR3-204ENST00000467733 LARGE1O95461 756 aa4.41□□□□□ -1.7
SSR3-204ENST00000467733 KLF8O95600 359 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms