RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 TFB1MQ8WVM0 346 aaKnown RBP12.5□□□□□ -0.41
CHPF2-202ENST00000465601 RAB7BQ96AH8 199 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 FEM1CQ96JP0 617 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 IL12RB2Q99665 862 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 FAM118BQ9BPY3 351 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 ORAI3Q9BRQ5 295 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 CEP41Q9BYV8 373 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 POLR1EQ9GZS1 481 aaKnown RBP12.5□□□□□ -0.41
CHPF2-202ENST00000465601 C10orf88Q9H8K7 445 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 FSCN3Q9NQT6 498 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 TRMT1Q9NXH9 659 aaKnown RBP12.5□□□□□ -0.41
CHPF2-202ENST00000465601 GGT7Q9UJ14 662 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 ITM2BQ9Y287 266 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 ATP8A1Q9Y2Q0 1164 aa12.5□□□□□ -0.41
CHPF2-202ENST00000465601 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.5□□□□□ -0.41
CHPF2-202ENST00000465601 PCNX2A6NKB5 2137 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 A0A1B0GTW7 788 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 TSPAN11A1L157 253 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 H7C0C1 242 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 NEMP1O14524 444 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 TRAFD1O14545 582 aaPredicted RBP12.49□□□□□ -0.41
CHPF2-202ENST00000465601 BCAT2O15382 392 aaPredicted RBP12.49□□□□□ -0.41
CHPF2-202ENST00000465601 SLC31A1O15431 190 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 SPINT1O43278 529 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 LATO43561 262 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 AP1G1O43747 822 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 TJP3O95049 919 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 PRKCGP05129 697 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 HOXD12P35452 270 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 ATP5OP48047 213 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 OTUD4Q01804 1114 aaKnown RBP12.49□□□□□ -0.41
CHPF2-202ENST00000465601 SEMG2Q02383 582 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 CCDC173Q0VFZ6 552 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 IHHQ14623 411 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 PRKD1Q15139 912 aaPredicted RBP12.49□□□□□ -0.41
CHPF2-202ENST00000465601 NOMO1Q15155 1222 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 UGP2Q16851 508 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 RALGPS1Q5JS13 557 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 SEL1L3Q68CR1 1132 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 NEK5Q6P3R8 708 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 BRAT1Q6PJG6 821 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 TRIM69Q86WT6 500 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 HORMAD1Q86X24 394 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 CNTD1Q8N815 330 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 C12orf50Q8NA57 414 aaPredicted RBP12.49□□□□□ -0.41
CHPF2-202ENST00000465601 TRIM58Q8NG06 486 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 ARRDC2Q8TBH0 407 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 ACTL9Q8TC94 416 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 PDCD6IPQ8WUM4 868 aaKnown RBP12.49□□□□□ -0.41
CHPF2-202ENST00000465601 UBE2Q2Q8WVN8 375 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 AGAP3Q96P47 875 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 RXFP3Q9NSD7 469 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 SUSD2Q9UGT4 822 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 AMACRQ9UHK6 382 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 SLC6A14Q9UN76 642 aa12.49□□□□□ -0.41
CHPF2-202ENST00000465601 ZFR2Q9UPR6 939 aaKnown RBP12.49□□□□□ -0.41
CHPF2-202ENST00000465601 TP53BP1Q12888 1972 aaPredicted RBP12.49□□□□□ -0.41
CHPF2-202ENST00000465601 GOLGA4Q13439 2230 aaKnown RBP12.48□□□□□ -0.41
CHPF2-202ENST00000465601 IGLON5A6NGN9 336 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 UPK3BL1B0FP48 263 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 HACD1B0YJ81 288 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 UPK3BL2E5RIL1 263 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 WNT9AO14904 365 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 AREL1O15033 823 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 ZSCAN12O43309 604 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 HTRA2O43464 458 aaPredicted RBP12.48□□□□□ -0.41
CHPF2-202ENST00000465601 TSPAN6O43657 245 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 SERPINF2P08697 491 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 PRLRP16471 622 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 CES1P23141 567 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 PTPN3P26045 913 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 CSNK1EP49674 416 aaKnown RBP12.48□□□□□ -0.41
CHPF2-202ENST00000465601 RPS21P63220 83 aaKnown RBP12.48□□□□□ -0.41
CHPF2-202ENST00000465601 TRAF2Q12933 501 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 XRCC4Q13426 336 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 ZNF284Q2VY69 593 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 AASDHQ4L235 1098 aaPredicted RBP12.48□□□□□ -0.41
CHPF2-202ENST00000465601 TEX44Q53QW1 395 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 SLC23A3Q6PIS1 610 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 RABEPKQ7Z6M1 372 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 ECHDC3Q96DC8 303 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 SERAC1Q96JX3 654 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 SLC6A18Q96N87 628 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 QKIQ96PU8 341 aaKnown RBP eCLIP12.48□□□□□ -0.41
CHPF2-202ENST00000465601 NUSAP1Q9BXS6 441 aaKnown RBP12.48□□□□□ -0.41
CHPF2-202ENST00000465601 CAPN10Q9HC96 672 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 TM9SF3Q9HD45 589 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 PCDH12Q9NPG4 1184 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 HAUS2Q9NVX0 235 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 PYCARDQ9ULZ3 195 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 PCDHB9Q9Y5E1 797 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 RAI2Q9Y5P3 530 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 TMEM131Q92545 1883 aa12.48□□□□□ -0.41
CHPF2-202ENST00000465601 TCRBV7S2A1N4TA0A589 114 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 GOLGA6L9A6NEM1 432 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 PRR5-ARHGAP8B1AHC4 643 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 KCNK3O14649 394 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 RIOK3O14730 519 aaKnown RBP12.47□□□□□ -0.41
CHPF2-202ENST00000465601 GDF9O60383 454 aa12.47□□□□□ -0.41
CHPF2-202ENST00000465601 MMP20O60882 483 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms