RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 ELP6Q0PNE2 266 aa23.02■■□□□ 1.28
USP42-205ENST00000465073 TMEM52BQ4KMG9 183 aa23.02■■□□□ 1.28
USP42-205ENST00000465073 C3orf38Q5JPI3 329 aa23.02■■□□□ 1.28
USP42-205ENST00000465073 DNAJC24Q6P3W2 148 aa23.02■■□□□ 1.28
USP42-205ENST00000465073 ANKRD20A12PQ8NF67 263 aa23.02■■□□□ 1.28
USP42-205ENST00000465073 NEK11Q8NG66 645 aa23.02■■□□□ 1.28
USP42-205ENST00000465073 ATXN7L3BQ96GX2 97 aa23.02■■□□□ 1.28
USP42-205ENST00000465073 VCPIP1Q96JH7 1222 aa23.02■■□□□ 1.28
USP42-205ENST00000465073 SLC46A1Q96NT5 459 aa23.02■■□□□ 1.28
USP42-205ENST00000465073 FZD10Q9ULW2 581 aa23.02■■□□□ 1.28
USP42-205ENST00000465073 PCDHGA8Q9Y5G5 932 aa23.02■■□□□ 1.28
USP42-205ENST00000465073 TCRBV5S1A1TA0A578 114 aa23.01■■□□□ 1.27
USP42-205ENST00000465073 TSHRP16473 764 aa23.01■■□□□ 1.27
USP42-205ENST00000465073 PEX5P50542 639 aa23.01■■□□□ 1.27
USP42-205ENST00000465073 COPB1P53618 953 aaKnown RBP23.01■■□□□ 1.27
USP42-205ENST00000465073 GRM3Q14832 879 aa23.01■■□□□ 1.27
USP42-205ENST00000465073 PERM1Q5SV97 790 aa23.01■■□□□ 1.27
USP42-205ENST00000465073 ESRP1Q6NXG1 681 aaKnown RBP23.01■■□□□ 1.27
USP42-205ENST00000465073 FSTL5Q8N475 847 aaPredicted RBP23.01■■□□□ 1.27
USP42-205ENST00000465073 NETO2Q8NC67 525 aa23.01■■□□□ 1.27
USP42-205ENST00000465073 NCAPGQ9BPX3 1015 aa23.01■■□□□ 1.27
USP42-205ENST00000465073 CNPY3Q9BT09 278 aa23.01■■□□□ 1.27
USP42-205ENST00000465073 CLPBQ9H078 707 aa23.01■■□□□ 1.27
USP42-205ENST00000465073 SEPT11Q9NVA2 429 aaKnown RBP23.01■■□□□ 1.27
USP42-205ENST00000465073 DONSONQ9NYP3 566 aa23.01■■□□□ 1.27
USP42-205ENST00000465073 LHX3Q9UBR4 397 aa23.01■■□□□ 1.27
USP42-205ENST00000465073 PADI4Q9UM07 663 aa23.01■■□□□ 1.27
USP42-205ENST00000465073 MGAQ8IWI9 3026 aa23.01■■□□□ 1.27
USP42-205ENST00000465073 FGF10O15520 208 aaPredicted RBP23■■□□□ 1.27
USP42-205ENST00000465073 KLK10O43240 276 aa23■■□□□ 1.27
USP42-205ENST00000465073 LRRC14Q15048 493 aa23■■□□□ 1.27
USP42-205ENST00000465073 IRF4Q15306 451 aa23■■□□□ 1.27
USP42-205ENST00000465073 CYTH1Q15438 398 aa23■■□□□ 1.27
USP42-205ENST00000465073 DNAAF5Q86Y56 855 aa23■■□□□ 1.27
USP42-205ENST00000465073 SCG3Q8WXD2 468 aaKnown RBP23■■□□□ 1.27
USP42-205ENST00000465073 AGPAT1Q99943 283 aa23■■□□□ 1.27
USP42-205ENST00000465073 UBA2Q9UBT2 640 aaPredicted RBP23■■□□□ 1.27
USP42-205ENST00000465073 LIMA1Q9UHB6 759 aaKnown RBP23■■□□□ 1.27
USP42-205ENST00000465073 A0A1W2PNU3 283 aaPredicted RBP22.99■■□□□ 1.27
USP42-205ENST00000465073 LGALS16A8MUM7 142 aa22.99■■□□□ 1.27
USP42-205ENST00000465073 ERVH48-1M5A8F1 160 aa22.99■■□□□ 1.27
USP42-205ENST00000465073 INSIG1O15503 277 aa22.99■■□□□ 1.27
USP42-205ENST00000465073 DESP17661 470 aa22.99■■□□□ 1.27
USP42-205ENST00000465073 HTR7P34969 479 aa22.99■■□□□ 1.27
USP42-205ENST00000465073 RPL7AP62424 266 aaKnown RBP22.99■■□□□ 1.27
USP42-205ENST00000465073 RHDQ02161 417 aa22.99■■□□□ 1.27
USP42-205ENST00000465073 ELOCQ15369 112 aa22.99■■□□□ 1.27
USP42-205ENST00000465073 LVRNQ6Q4G3 990 aa22.99■■□□□ 1.27
USP42-205ENST00000465073 CRTC1Q6UUV9 634 aa22.99■■□□□ 1.27
USP42-205ENST00000465073 CCDC97Q96F63 343 aaPredicted RBP22.99■■□□□ 1.27
USP42-205ENST00000465073 ZNF641Q96N77 438 aaPredicted RBP22.99■■□□□ 1.27
USP42-205ENST00000465073 MCEEQ96PE7 176 aa22.99■■□□□ 1.27
USP42-205ENST00000465073 SUV39H2Q9H5I1 410 aa22.99■■□□□ 1.27
USP42-205ENST00000465073 DOLKQ9UPQ8 538 aa22.99■■□□□ 1.27
USP42-205ENST00000465073 TSPAN11A1L157 253 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 ALPIP09923 528 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 HK3P52790 923 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 UGP2Q16851 508 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 WSCD2Q2TBF2 565 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 PPP1R15BQ5SWA1 713 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 CLEC17AQ6ZS10 378 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 SDR16C5Q8N3Y7 309 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 WBP1Q96G27 269 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 CCDC3Q9BQI4 270 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 CPNE5Q9HCH3 593 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 PCDH12Q9NPG4 1184 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 LMBRD1Q9NUN5 540 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 CAPN8A6NHC0 703 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 RASGRP1O95267 797 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 PIGNO95427 931 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 HTR1BP28222 390 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 MLLT3P42568 568 aaPredicted RBP22.98■■□□□ 1.27
USP42-205ENST00000465073 NDST2P52849 883 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 UBXN1Q04323 297 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 ARHGAP40Q5TG30 622 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 ERAP2Q6P179 960 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 DCUN1D2Q6PH85 259 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 BRAT1Q6PJG6 821 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 PCSK4Q6UW60 755 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 RBM43Q6ZSC3 357 aaKnown RBP22.98■■□□□ 1.27
USP42-205ENST00000465073 HID1Q8IV36 788 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 ZNF843Q8N446 348 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 ARL14Q8N4G2 192 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 ARL10Q8N8L6 244 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 WDR36Q8NI36 951 aaKnown RBP22.98■■□□□ 1.27
USP42-205ENST00000465073 PRR11Q96HE9 360 aaPredicted RBP22.98■■□□□ 1.27
USP42-205ENST00000465073 EXOC2Q96KP1 924 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 ERGIC2Q96RQ1 377 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 LRRC19Q9H756 370 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 PDFQ9HBH1 243 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 SSUH2Q9Y2M2 353 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 COQ6Q9Y2Z9 468 aa22.98■■□□□ 1.27
USP42-205ENST00000465073 CFAP46Q8IYW2 2715 aa22.97■■□□□ 1.27
USP42-205ENST00000465073 LRRC10BA6NIK2 292 aa22.97■■□□□ 1.27
USP42-205ENST00000465073 CCDC172P0C7W6 258 aa22.97■■□□□ 1.27
USP42-205ENST00000465073 C6P13671 934 aa22.97■■□□□ 1.27
USP42-205ENST00000465073 CTSEP14091 401 aa22.97■■□□□ 1.27
USP42-205ENST00000465073 TPI1P60174 286 aa22.97■■□□□ 1.27
USP42-205ENST00000465073 SKOR1P84550 965 aa22.97■■□□□ 1.27
USP42-205ENST00000465073 SPIDRQ14159 915 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms