RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 LAMP2P13473 410 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 ZNF8P17098 575 aaPredicted RBP4.32□□□□□ -1.72
CLK1-208ENST00000464454 BSGP35613 385 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 RGS2P41220 211 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 GABRB2P47870 512 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 FOXG1P55316 489 aaPredicted RBP4.32□□□□□ -1.72
CLK1-208ENST00000464454 SELENOVP59797 346 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 SLC18A2Q05940 514 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 PDE1CQ14123 709 aaPredicted RBP4.32□□□□□ -1.72
CLK1-208ENST00000464454 CCNG2Q16589 344 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 HIST2H2ACQ16777 129 aaPredicted RBP4.32□□□□□ -1.72
CLK1-208ENST00000464454 DUSP6Q16828 381 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 DNTTIP2Q5QJE6 756 aaKnown RBP4.32□□□□□ -1.72
CLK1-208ENST00000464454 DCAF12L2Q5VW00 463 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 SNX30Q5VWJ9 437 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 CDC73Q6P1J9 531 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 CFAP161Q6P656 301 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 PDXDC1Q6P996 788 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 ZNF549Q6P9A3 640 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 KLHL24Q6TFL4 600 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 Q6ZTK2 550 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 PXKQ7Z7A4 578 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 GLCCI1Q86VQ1 547 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 PALB2Q86YC2 1186 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 CCDC105Q8IYK2 499 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 ENGASEQ8NFI3 743 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 CADM4Q8NFZ8 388 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 RASSF8Q8NHQ8 419 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 TMEM163Q8TC26 289 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 WACQ9BTA9 647 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 MRPL44Q9H9J2 332 aaKnown RBP4.32□□□□□ -1.72
CLK1-208ENST00000464454 PLAC1Q9HBJ0 212 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 PLK2Q9NYY3 685 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 A4GNTQ9UNA3 340 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 PIAS3Q9Y6X2 628 aa4.32□□□□□ -1.72
CLK1-208ENST00000464454 FSD2A1L4K1 749 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 TYW5A2RUC4 315 aaKnown RBP4.31□□□□□ -1.72
CLK1-208ENST00000464454 CBY3A6NI87 242 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 HSPB6O14558 160 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 ACADMP11310 421 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 PCNAP12004 261 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 NFKBIAP25963 317 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 ICAM3P32942 547 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 CDH12P55289 794 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 TMPRSS3P57727 454 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 LINC00205P59089 165 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 TMEM115Q12893 351 aaPredicted RBP4.31□□□□□ -1.72
CLK1-208ENST00000464454 FHL1Q13642 323 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 RUNX2Q13950 521 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 ODF3L2Q3SX64 289 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 SPATA1Q5VX52 437 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 TMEM71Q6P5X7 295 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 TBC1D26Q86UD7 250 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 CADM3Q8N126 398 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 CEP76Q8TAP6 659 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 USP6NLQ92738 828 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 SMARCE1Q969G3 411 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 RNF183Q96D59 192 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 PIP5K1AQ99755 562 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 SDF4Q9BRK5 362 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 TMX4Q9H1E5 349 aaPredicted RBP4.31□□□□□ -1.72
CLK1-208ENST00000464454 WDR6Q9NNW5 1121 aaKnown RBP4.31□□□□□ -1.72
CLK1-208ENST00000464454 EIF2B3Q9NR50 452 aaKnown RBP4.31□□□□□ -1.72
CLK1-208ENST00000464454 SPATS2LQ9NUQ6 558 aaKnown RBP4.31□□□□□ -1.72
CLK1-208ENST00000464454 LIMA1Q9UHB6 759 aaKnown RBP4.31□□□□□ -1.72
CLK1-208ENST00000464454 FZD10Q9ULW2 581 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 SRPRBQ9Y5M8 271 aaKnown RBP4.31□□□□□ -1.72
CLK1-208ENST00000464454 TTC3P53804 2025 aa4.31□□□□□ -1.72
CLK1-208ENST00000464454 OR6C75A6NL08 312 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 EIF3CLB5ME19 914 aaKnown RBP4.3□□□□□ -1.72
CLK1-208ENST00000464454 TAF4O00268 1085 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 VWA5AO00534 786 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 EBAG9O00559 213 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 LDLRAD4O15165 306 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 KCNAB3O43448 404 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 SPRY3O43610 288 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 PTP4A3O75365 173 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 LDHCP07864 332 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 CTPS1P17812 591 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 TTKP33981 857 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 RYKP34925 604 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 PPP3CCP48454 512 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 GNAQP50148 359 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 DRG2P55039 364 aaKnown RBP4.3□□□□□ -1.72
CLK1-208ENST00000464454 OLR1P78380 273 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 PRKG2Q13237 762 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 PPP2R5BQ15173 497 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 RNPS1Q15287 305 aaKnown RBP4.3□□□□□ -1.72
CLK1-208ENST00000464454 PLEKHO1Q53GL0 409 aaPredicted RBP4.3□□□□□ -1.72
CLK1-208ENST00000464454 TXNDC8Q6A555 127 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 FASTKD5Q7L8L6 764 aaKnown RBP4.3□□□□□ -1.72
CLK1-208ENST00000464454 GSTA5Q7RTV2 222 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 CTU1Q7Z7A3 348 aaKnown RBP4.3□□□□□ -1.72
CLK1-208ENST00000464454 PATL1Q86TB9 770 aaKnown RBP4.3□□□□□ -1.72
CLK1-208ENST00000464454 LURAP1LQ8IV03 231 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 KIAA2013Q8IYS2 634 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 PELI3Q8N2H9 469 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 PDILTQ8N807 584 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 C9orf106Q8NAJ2 232 aa4.3□□□□□ -1.72
CLK1-208ENST00000464454 MCPH1Q8NEM0 835 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms