RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 MYOCQ99972 504 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 ZDHHC5Q9C0B5 715 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 ATP13A3Q9H7F0 1226 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 IL21RQ9HBE5 538 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 FZD3Q9NPG1 666 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 DTLQ9NZJ0 730 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 DKK3Q9UBP4 350 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 EFR3BQ9Y2G0 817 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 JRKLQ9Y4A0 524 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 HEY1Q9Y5J3 304 aa17.21■□□□□ 0.35
VPS52-215ENST00000464425 DOCK9Q9BZ29 2069 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 PCDH15Q96QU1 1955 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 DNAH14Q0VDD8 3507 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 TM4SF5O14894 197 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 SPINT1O43278 529 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 AP1G1O43747 822 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 OPHN1O60890 802 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 KRT10P13645 584 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 MX2P20592 715 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 XPAP23025 273 aaPredicted RBP17.2■□□□□ 0.34
VPS52-215ENST00000464425 CD38P28907 300 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 C21orf59P57076 290 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 RPS21P63220 83 aaKnown RBP17.2■□□□□ 0.34
VPS52-215ENST00000464425 BCL2L1Q07817 233 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 ITKQ08881 620 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 STAT4Q14765 748 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 RPS6KA1Q15418 735 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 PPP2R5EQ16537 467 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 SLC9A4Q6AI14 798 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 NPNTQ6UXI9 565 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 SPOCD1Q6ZMY3 1216 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 PAF1Q8N7H5 531 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 CCNYQ8ND76 341 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 ZNF641Q96N77 438 aaPredicted RBP17.2■□□□□ 0.34
VPS52-215ENST00000464425 GAREM1Q9H706 876 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 NT5MQ9NPB1 228 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 SCUBE2Q9NQ36 999 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 PACSIN2Q9UNF0 486 aaPredicted RBP17.2■□□□□ 0.34
VPS52-215ENST00000464425 DMTF1Q9Y222 760 aa17.2■□□□□ 0.34
VPS52-215ENST00000464425 IGLON5A6NGN9 336 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 PRAMEF26H0Y7S4 382 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 AREL1O15033 823 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 VILLO15195 856 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 TSPAN6O43657 245 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 PAK4O96013 591 aaPredicted RBP17.19■□□□□ 0.34
VPS52-215ENST00000464425 PRKCGP05129 697 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 ZFXP17010 805 aaPredicted RBP17.19■□□□□ 0.34
VPS52-215ENST00000464425 KCNA4P22459 653 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 CCNCP24863 283 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 SERPINA4P29622 427 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 PTPN7P35236 360 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 NUDT1P36639 197 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 HSPA9P38646 679 aaKnown RBP17.19■□□□□ 0.34
VPS52-215ENST00000464425 CETN2P41208 172 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 AP1S1P61966 158 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 SEMG2Q02383 582 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 FGL2Q14314 439 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 TMEM259Q4ZIN3 620 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 ZNF569Q5MCW4 686 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 PRAMEF14Q5SWL7 426 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 KAZNQ674X7 775 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 KIAA1161Q6NSJ0 714 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 TIGD7Q6NT04 549 aaPredicted RBP17.19■□□□□ 0.34
VPS52-215ENST00000464425 IL27RAQ6UWB1 636 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 ZSWIM9Q86XI8 627 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 CCDC50Q8IVM0 306 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.19■□□□□ 0.34
VPS52-215ENST00000464425 TSGA13Q96PP4 275 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 LGMNQ99538 433 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 MGME1Q9BQP7 344 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 TLR10Q9BXR5 811 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 SLC17A9Q9BYT1 436 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 NOD2Q9HC29 1040 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 ASCC3Q8N3C0 2202 aaKnown RBP17.19■□□□□ 0.34
VPS52-215ENST00000464425 SHROOM3Q8TF72 1996 aa17.19■□□□□ 0.34
VPS52-215ENST00000464425 PLXNA2O75051 1894 aa17.18■□□□□ 0.34
VPS52-215ENST00000464425 A0A1W2PR77 199 aa17.18■□□□□ 0.34
VPS52-215ENST00000464425 TSPAN11A1L157 253 aa17.18■□□□□ 0.34
VPS52-215ENST00000464425 MATN3O15232 486 aa17.18■□□□□ 0.34
VPS52-215ENST00000464425 MMP20O60882 483 aa17.18■□□□□ 0.34
VPS52-215ENST00000464425 PYGMP11217 842 aa17.18■□□□□ 0.34
VPS52-215ENST00000464425 CR2P20023 1033 aa17.18■□□□□ 0.34
VPS52-215ENST00000464425 SGCGQ13326 291 aa17.18■□□□□ 0.34
VPS52-215ENST00000464425 HNRNPDQ14103 355 aaKnown RBP17.18■□□□□ 0.34
VPS52-215ENST00000464425 TFDP2Q14188 446 aa17.18■□□□□ 0.34
VPS52-215ENST00000464425 UGP2Q16851 508 aa17.18■□□□□ 0.34
VPS52-215ENST00000464425 SLC45A4Q5BKX6 768 aa17.18■□□□□ 0.34
VPS52-215ENST00000464425 FAM182AQ5T1J6 154 aa17.18■□□□□ 0.34
VPS52-215ENST00000464425 B4GALNT4Q76KP1 1039 aa17.18■□□□□ 0.34
VPS52-215ENST00000464425 CCDC13Q8IYE1 715 aa17.18■□□□□ 0.34
VPS52-215ENST00000464425 TEX26Q8N6G2 289 aa17.18■□□□□ 0.34
VPS52-215ENST00000464425 HCAR2Q8TDS4 363 aa17.18■□□□□ 0.34
VPS52-215ENST00000464425 SKA1Q96BD8 255 aa17.18■□□□□ 0.34
VPS52-215ENST00000464425 NUDCD1Q96RS6 583 aa17.18■□□□□ 0.34
VPS52-215ENST00000464425 WRAP53Q9BUR4 548 aaKnown RBP17.18■□□□□ 0.34
VPS52-215ENST00000464425 PCDH12Q9NPG4 1184 aa17.18■□□□□ 0.34
VPS52-215ENST00000464425 DNAAF2Q9NVR5 837 aaKnown RBP17.18■□□□□ 0.34
VPS52-215ENST00000464425 RBM22Q9NW64 420 aaKnown RBP eCLIP17.18■□□□□ 0.34
VPS52-215ENST00000464425 SAE1Q9UBE0 346 aaPredicted RBP17.18■□□□□ 0.34
VPS52-215ENST00000464425 FNDC3AQ9Y2H6 1198 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms