RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 NTN3O00634 580 aaPredicted RBP20.01■□□□□ 0.79
VARS-221ENST00000463184 TMCC1O94876 653 aa20.01■□□□□ 0.79
VARS-221ENST00000463184 TNFSF15O95150 251 aa20.01■□□□□ 0.79
VARS-221ENST00000463184 IGSF6O95976 241 aa20.01■□□□□ 0.79
VARS-221ENST00000463184 C6P13671 934 aa20.01■□□□□ 0.79
VARS-221ENST00000463184 PEX5P50542 639 aa20.01■□□□□ 0.79
VARS-221ENST00000463184 SUOXP51687 545 aa20.01■□□□□ 0.79
VARS-221ENST00000463184 CDR2Q01850 454 aa20.01■□□□□ 0.79
VARS-221ENST00000463184 IQCB1Q15051 598 aa20.01■□□□□ 0.79
VARS-221ENST00000463184 ELOCQ15369 112 aa20.01■□□□□ 0.79
VARS-221ENST00000463184 LVRNQ6Q4G3 990 aa20.01■□□□□ 0.79
VARS-221ENST00000463184 ZNF354CQ86Y25 554 aa20.01■□□□□ 0.79
VARS-221ENST00000463184 SDR16C5Q8N3Y7 309 aa20.01■□□□□ 0.79
VARS-221ENST00000463184 ANKRD20A12PQ8NF67 263 aa20.01■□□□□ 0.79
VARS-221ENST00000463184 NTAN1Q96AB6 310 aa20.01■□□□□ 0.79
VARS-221ENST00000463184 MAGEB5Q9BZ81 275 aa20.01■□□□□ 0.79
VARS-221ENST00000463184 SEMA4CQ9C0C4 833 aa20.01■□□□□ 0.79
VARS-221ENST00000463184 ITGA2BP08514 1039 aa20■□□□□ 0.79
VARS-221ENST00000463184 ALPIP09923 528 aa20■□□□□ 0.79
VARS-221ENST00000463184 TIMP2P16035 220 aa20■□□□□ 0.79
VARS-221ENST00000463184 CDK11BP21127 795 aaKnown RBP20■□□□□ 0.79
VARS-221ENST00000463184 PDX1P52945 283 aa20■□□□□ 0.79
VARS-221ENST00000463184 HDAC4P56524 1084 aa20■□□□□ 0.79
VARS-221ENST00000463184 LY6DQ14210 128 aa20■□□□□ 0.79
VARS-221ENST00000463184 TMEM52BQ4KMG9 183 aa20■□□□□ 0.79
VARS-221ENST00000463184 LRRC73Q5JTD7 316 aa20■□□□□ 0.79
VARS-221ENST00000463184 CCDC81Q6ZN84 652 aa20■□□□□ 0.79
VARS-221ENST00000463184 PHLDB2Q86SQ0 1253 aa20■□□□□ 0.79
VARS-221ENST00000463184 CCDC185Q8N715 623 aa20■□□□□ 0.79
VARS-221ENST00000463184 ARL10Q8N8L6 244 aa20■□□□□ 0.79
VARS-221ENST00000463184 JOSD2Q8TAC2 188 aa20■□□□□ 0.79
VARS-221ENST00000463184 HCAR2Q8TDS4 363 aa20■□□□□ 0.79
VARS-221ENST00000463184 FAM172AQ8WUF8 416 aa20■□□□□ 0.79
VARS-221ENST00000463184 SLC20A1Q8WUM9 679 aa20■□□□□ 0.79
VARS-221ENST00000463184 LIN37Q96GY3 246 aaPredicted RBP20■□□□□ 0.79
VARS-221ENST00000463184 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20■□□□□ 0.79
VARS-221ENST00000463184 CPEB1Q9BZB8 566 aaKnown RBP20■□□□□ 0.79
VARS-221ENST00000463184 EIF2AK3Q9NZJ5 1116 aaKnown RBP20■□□□□ 0.79
VARS-221ENST00000463184 PMS2P1A4D2B8 440 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 B8ZZF3 427 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 TMX2-CTNND1H3BSU7 103 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 GFPT2O94808 682 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 TPM2P07951 284 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 KRT3P12035 628 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 CTSEP14091 401 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 ITIH2P19823 946 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 XPAP23025 273 aaPredicted RBP19.99■□□□□ 0.79
VARS-221ENST00000463184 HK3P52790 923 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 RHOAP61586 193 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 FMO1Q01740 532 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 ELP6Q0PNE2 266 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 EIF3IQ13347 325 aaKnown RBP19.99■□□□□ 0.79
VARS-221ENST00000463184 LRRC14Q15048 493 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 IRF4Q15306 451 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 KRT31Q15323 416 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 TRIM72Q6ZMU5 477 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 SLFN11Q7Z7L1 901 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 RTL3Q8N8U3 475 aaKnown RBP19.99■□□□□ 0.79
VARS-221ENST00000463184 SLC30A5Q8TAD4 765 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 MED8Q96G25 268 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 C11orf70Q9BRQ4 267 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 WRAP53Q9BUR4 548 aaKnown RBP19.99■□□□□ 0.79
VARS-221ENST00000463184 HSD3B7Q9H2F3 369 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 SYNDIG1Q9H7V2 258 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 CBX8Q9HC52 389 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 GULP1Q9UBP9 304 aa19.99■□□□□ 0.79
VARS-221ENST00000463184 CASC3O15234 703 aaKnown RBP19.98■□□□□ 0.79
VARS-221ENST00000463184 CHRNB2P17787 502 aa19.98■□□□□ 0.79
VARS-221ENST00000463184 HTR1BP28222 390 aa19.98■□□□□ 0.79
VARS-221ENST00000463184 GSCP56915 257 aaPredicted RBP19.98■□□□□ 0.79
VARS-221ENST00000463184 YBEYP58557 167 aaPredicted RBP19.98■□□□□ 0.79
VARS-221ENST00000463184 CLN3Q13286 438 aa19.98■□□□□ 0.79
VARS-221ENST00000463184 KIF26BQ2KJY2 2108 aa19.98■□□□□ 0.79
VARS-221ENST00000463184 GKN2Q86XP6 184 aa19.98■□□□□ 0.79
VARS-221ENST00000463184 HID1Q8IV36 788 aa19.98■□□□□ 0.79
VARS-221ENST00000463184 OR6C4Q8NGE1 309 aa19.98■□□□□ 0.79
VARS-221ENST00000463184 EDEM3Q9BZQ6 932 aa19.98■□□□□ 0.79
VARS-221ENST00000463184 TSPY26PQ9H489 355 aa19.98■□□□□ 0.79
VARS-221ENST00000463184 NOL6Q9H6R4 1146 aaKnown RBP19.98■□□□□ 0.79
VARS-221ENST00000463184 TAB2Q9NYJ8 693 aa19.98■□□□□ 0.79
VARS-221ENST00000463184 LIMA1Q9UHB6 759 aaKnown RBP19.98■□□□□ 0.79
VARS-221ENST00000463184 LRRC10BA6NIK2 292 aa19.97■□□□□ 0.79
VARS-221ENST00000463184 PLD2O14939 933 aa19.97■□□□□ 0.79
VARS-221ENST00000463184 RASGRP1O95267 797 aa19.97■□□□□ 0.79
VARS-221ENST00000463184 GJB6O95452 261 aa19.97■□□□□ 0.79
VARS-221ENST00000463184 CELA2BP08218 269 aaPredicted RBP19.97■□□□□ 0.79
VARS-221ENST00000463184 UNGP13051 313 aaPredicted RBP19.97■□□□□ 0.79
VARS-221ENST00000463184 EPHB2P29323 1055 aa19.97■□□□□ 0.79
VARS-221ENST00000463184 SOX5P35711 763 aa19.97■□□□□ 0.79
VARS-221ENST00000463184 TPM4P67936 248 aa19.97■□□□□ 0.79
VARS-221ENST00000463184 C1QBPQ07021 282 aaKnown RBP19.97■□□□□ 0.79
VARS-221ENST00000463184 GRM3Q14832 879 aa19.97■□□□□ 0.79
VARS-221ENST00000463184 KIAA1614Q5VZ46 1190 aa19.97■□□□□ 0.79
VARS-221ENST00000463184 FBXO39Q8N4B4 442 aa19.97■□□□□ 0.79
VARS-221ENST00000463184 ATL2Q8NHH9 583 aa19.97■□□□□ 0.79
VARS-221ENST00000463184 PCDH19Q8TAB3 1148 aa19.97■□□□□ 0.79
VARS-221ENST00000463184 TSACCQ96A04 125 aaPredicted RBP19.97■□□□□ 0.79
VARS-221ENST00000463184 COL26A1Q96A83 441 aa19.97■□□□□ 0.79
VARS-221ENST00000463184 GFM1Q96RP9 751 aaKnown RBP19.97■□□□□ 0.79
VARS-221ENST00000463184 CCNL2Q96S94 520 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms