RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 IL4RP24394 825 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 MIPP30301 263 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 ARHGAP25P42331 645 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 CDH4P55283 916 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 GSDMDP57764 484 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 CCZ1BP86790 482 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 CCZ1P86791 482 aaPredicted RBP5.89□□□□□ -1.47
VPS36-202ENST00000462289 TCF15Q12870 199 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 DPYSQ14117 519 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 LRRC32Q14392 662 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 DMC1Q14565 340 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 PON2Q15165 354 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 GEN1Q17RS7 908 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 PREPLQ4J6C6 727 aaPredicted RBP5.89□□□□□ -1.47
VPS36-202ENST00000462289 ALFQ53S48 1182 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 FSCBQ5H9T9 825 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 CCDC122Q5T0U0 273 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 FAM72AQ5TYM5 149 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 LRRC38Q5VT99 294 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 FAM72DQ6L9T8 149 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 RFWD3Q6PCD5 774 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 Q6ZS52 159 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 SYT13Q7L8C5 426 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 POLNQ7Z5Q5 900 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 SLFN11Q7Z7L1 901 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 SETD3Q86TU7 594 aaPredicted RBP5.89□□□□□ -1.47
VPS36-202ENST00000462289 RASSF3Q86WH2 238 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 FAM72BQ86X60 149 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 FAM131BQ86XD5 332 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 RHOT2Q8IXI1 618 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 CCAR2Q8N163 923 aaKnown RBP5.89□□□□□ -1.47
VPS36-202ENST00000462289 UMODL1-AS1Q8N2C9 162 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 LRRC57Q8N9N7 239 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 IL17RCQ8NAC3 791 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 ZBTB44Q8NCP5 570 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 CCDC26Q8TAB7 109 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 ZNF564Q8TBZ8 553 aaPredicted RBP5.89□□□□□ -1.47
VPS36-202ENST00000462289 WFIKKN2Q8TEU8 576 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 ZNF653Q96CK0 615 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 TMA16Q96EY4 203 aaKnown RBP5.89□□□□□ -1.47
VPS36-202ENST00000462289 MRGPRX3Q96LB0 322 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 C20orf173Q96LM9 149 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 CCDC42Q96M95 316 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 PRRX2Q99811 253 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 NUP85Q9BW27 656 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 ACE2Q9BYF1 805 aaPredicted RBP5.89□□□□□ -1.47
VPS36-202ENST00000462289 MAGEB5Q9BZ81 275 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 FAM204AQ9H8W3 233 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 SPTLC3Q9NUV7 552 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 TMEM248Q9NWD8 314 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 ZNHIT6Q9NWK9 470 aaKnown RBP5.89□□□□□ -1.47
VPS36-202ENST00000462289 C2orf42Q9NWW7 574 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 RCOR3Q9P2K3 495 aaPredicted RBP5.89□□□□□ -1.47
VPS36-202ENST00000462289 DEC1Q9P2X7 70 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 THAP10Q9P2Z0 257 aaPredicted RBP5.89□□□□□ -1.47
VPS36-202ENST00000462289 IP6K2Q9UHH9 426 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 MBD1Q9UIS9 605 aaPredicted RBP5.89□□□□□ -1.47
VPS36-202ENST00000462289 FBXO4Q9UKT5 387 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 FBXL21Q9UKT6 434 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 CNOT6Q9ULM6 557 aaKnown RBP5.89□□□□□ -1.47
VPS36-202ENST00000462289 HS3ST2Q9Y278 367 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 EPN1Q9Y6I3 576 aaPredicted RBP5.89□□□□□ -1.47
VPS36-202ENST00000462289 LRRK1Q38SD2 2015 aa5.89□□□□□ -1.47
VPS36-202ENST00000462289 LAMA1P25391 3075 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 ZFHX2Q9C0A1 2572 aaPredicted RBP5.88□□□□□ -1.47
VPS36-202ENST00000462289 THADAQ6YHU6 1953 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 ILVBLA1L0T0 632 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 FAM86C2PA6NEL3 165 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 C3orf70A6NLC5 250 aaPredicted RBP5.88□□□□□ -1.47
VPS36-202ENST00000462289 TMCO5BA8MYB1 307 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 B8ZZF3 427 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 PROB1E7EW31 1015 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 E9PAM4 449 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 F5H5T6 163 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 DCLK1O15075 740 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 NCAM2O15394 837 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 AKR1B10O60218 316 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 CNTN5O94779 1100 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 PRAMEF1O95521 474 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 IGLV3-19P01714 112 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 HMBSP08397 361 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 PABPC1P11940 636 aaKnown RBP5.88□□□□□ -1.47
VPS36-202ENST00000462289 HOXA5P20719 270 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 CD70P32970 193 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 MAPKAPK2P49137 400 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 MRE11P49959 708 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 VAV2P52735 878 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 RNASE9P60153 205 aaKnown RBP5.88□□□□□ -1.47
VPS36-202ENST00000462289 GRSF1Q12849 480 aaKnown RBP eCLIP5.88□□□□□ -1.47
VPS36-202ENST00000462289 LMAN2Q12907 356 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 MTAPQ13126 283 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 NME3Q13232 169 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 PLEKHG6Q3KR16 790 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 FUT11Q495W5 492 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 BOLA3Q53S33 107 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 ZNF385BQ569K4 471 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 C2orf27AQ580R0 203 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 ERMARDQ5T6L9 678 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 RAP1GAP2Q684P5 730 aa5.88□□□□□ -1.47
VPS36-202ENST00000462289 TXNRD3NBQ6F5E7 133 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms