RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 SYT11Q9BT88 431 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 SLC13A1Q9BZW2 595 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 LRRC19Q9H756 370 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 PDFQ9HBH1 243 aa18.06■□□□□ 0.48
SSB-206ENST00000461708 COL27A1Q8IZC6 1860 aaPredicted RBP18.05■□□□□ 0.48
SSB-206ENST00000461708 LRRK1Q38SD2 2015 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 ATXN7O15265 892 aaPredicted RBP18.05■□□□□ 0.48
SSB-206ENST00000461708 PRAMEF11O60813 436 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 GCATO75600 419 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 XPAP23025 273 aaPredicted RBP18.05■□□□□ 0.48
SSB-206ENST00000461708 EIF4A3P38919 411 aaKnown RBP18.05■□□□□ 0.48
SSB-206ENST00000461708 CSNK1DP48730 415 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 BLKP51451 505 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 GABREP78334 506 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 NCAPHQ15003 741 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 CDKN3Q16667 212 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 UGP2Q16851 508 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 KLHL40Q2TBA0 621 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 DEFB133Q30KQ1 61 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 PRRT3Q5FWE3 981 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 C6orf132Q5T0Z8 1188 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 GUSBP11Q6P575 273 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 BRAT1Q6PJG6 821 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 LVRNQ6Q4G3 990 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 EFL1Q7Z2Z2 1120 aaKnown RBP18.05■□□□□ 0.48
SSB-206ENST00000461708 IRF2BP2Q7Z5L9 587 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 SPACA3Q8IXA5 215 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 FSTL5Q8N475 847 aaPredicted RBP18.05■□□□□ 0.48
SSB-206ENST00000461708 FCRL3Q96P31 734 aaPredicted RBP18.05■□□□□ 0.48
SSB-206ENST00000461708 TUBGCP5Q96RT8 1024 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 LRRC61Q9BV99 259 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 HSD3B7Q9H2F3 369 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 SUV39H2Q9H5I1 410 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 PARVAQ9NVD7 372 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 UBA2Q9UBT2 640 aaPredicted RBP18.05■□□□□ 0.48
SSB-206ENST00000461708 RAI2Q9Y5P3 530 aa18.05■□□□□ 0.48
SSB-206ENST00000461708 TEX51A0A1B0GUA7 166 aa18.04■□□□□ 0.48
SSB-206ENST00000461708 CPED1A4D0V7 1026 aa18.04■□□□□ 0.48
SSB-206ENST00000461708 CFAP69A5D8W1 941 aa18.04■□□□□ 0.48
SSB-206ENST00000461708 MPOP05164 745 aa18.04■□□□□ 0.48
SSB-206ENST00000461708 ANXA6P08133 673 aa18.04■□□□□ 0.48
SSB-206ENST00000461708 TGM2P21980 687 aa18.04■□□□□ 0.48
SSB-206ENST00000461708 UCNP55089 124 aa18.04■□□□□ 0.48
SSB-206ENST00000461708 ADKP55263 362 aaKnown RBP18.04■□□□□ 0.48
SSB-206ENST00000461708 TPI1P60174 286 aa18.04■□□□□ 0.48
SSB-206ENST00000461708 PPARDQ03181 441 aa18.04■□□□□ 0.48
SSB-206ENST00000461708 MAMLD1Q13495 774 aa18.04■□□□□ 0.48
SSB-206ENST00000461708 LRRC14Q15048 493 aa18.04■□□□□ 0.48
SSB-206ENST00000461708 GPR155Q7Z3F1 870 aa18.04■□□□□ 0.48
SSB-206ENST00000461708 RBFAQ8N0V3 343 aa18.04■□□□□ 0.48
SSB-206ENST00000461708 NCAPGQ9BPX3 1015 aa18.04■□□□□ 0.48
SSB-206ENST00000461708 WRAP53Q9BUR4 548 aaKnown RBP18.04■□□□□ 0.48
SSB-206ENST00000461708 ASCL3Q9NQ33 180 aa18.04■□□□□ 0.48
SSB-206ENST00000461708 MBNL1Q9NR56 388 aaKnown RBP18.04■□□□□ 0.48
SSB-206ENST00000461708 PNMA8BQ9ULN7 279 aaPredicted RBP18.04■□□□□ 0.48
SSB-206ENST00000461708 ZNF462Q96JM2 2506 aa18.03■□□□□ 0.48
SSB-206ENST00000461708 INSIG1O15503 277 aa18.03■□□□□ 0.48
SSB-206ENST00000461708 ITIH2P19823 946 aa18.03■□□□□ 0.48
SSB-206ENST00000461708 MLLT3P42568 568 aaPredicted RBP18.03■□□□□ 0.48
SSB-206ENST00000461708 ZNF135P52742 658 aaPredicted RBP18.03■□□□□ 0.48
SSB-206ENST00000461708 OGDHQ02218 1023 aa18.03■□□□□ 0.48
SSB-206ENST00000461708 CCDC173Q0VFZ6 552 aa18.03■□□□□ 0.48
SSB-206ENST00000461708 IRF4Q15306 451 aa18.03■□□□□ 0.48
SSB-206ENST00000461708 LRRC73Q5JTD7 316 aa18.03■□□□□ 0.48
SSB-206ENST00000461708 FAXCQ5TGI0 409 aa18.03■□□□□ 0.48
SSB-206ENST00000461708 PLEKHA7Q6IQ23 1121 aa18.03■□□□□ 0.48
SSB-206ENST00000461708 ERAP2Q6P179 960 aa18.03■□□□□ 0.48
SSB-206ENST00000461708 RBM44Q6ZP01 1051 aaKnown RBP18.03■□□□□ 0.48
SSB-206ENST00000461708 PSTKQ8IV42 348 aaKnown RBP18.03■□□□□ 0.48
SSB-206ENST00000461708 SLC35F3Q8IY50 421 aa18.03■□□□□ 0.48
SSB-206ENST00000461708 ATL2Q8NHH9 583 aa18.03■□□□□ 0.48
SSB-206ENST00000461708 LGMNQ99538 433 aa18.03■□□□□ 0.48
SSB-206ENST00000461708 TCEAL2Q9H3H9 227 aaPredicted RBP18.03■□□□□ 0.48
SSB-206ENST00000461708 PCDH12Q9NPG4 1184 aa18.03■□□□□ 0.48
SSB-206ENST00000461708 THSD1Q9NS62 852 aa18.03■□□□□ 0.48
SSB-206ENST00000461708 PCDHGA8Q9Y5G5 932 aa18.03■□□□□ 0.48
SSB-206ENST00000461708 ARHGAP42A6NI28 874 aa18.02■□□□□ 0.48
SSB-206ENST00000461708 GOLGA6L22H0YM25 854 aa18.02■□□□□ 0.48
SSB-206ENST00000461708 YY2O15391 372 aa18.02■□□□□ 0.48
SSB-206ENST00000461708 ALPIP09923 528 aa18.02■□□□□ 0.48
SSB-206ENST00000461708 TSHRP16473 764 aa18.02■□□□□ 0.48
SSB-206ENST00000461708 TNFAIP3P21580 790 aa18.02■□□□□ 0.48
SSB-206ENST00000461708 HTR1BP28222 390 aa18.02■□□□□ 0.48
SSB-206ENST00000461708 ANP32AP39687 249 aaKnown RBP18.02■□□□□ 0.48
SSB-206ENST00000461708 HK3P52790 923 aa18.02■□□□□ 0.48
SSB-206ENST00000461708 ELOCQ15369 112 aa18.02■□□□□ 0.48
SSB-206ENST00000461708 WSCD2Q2TBF2 565 aa18.02■□□□□ 0.48
SSB-206ENST00000461708 ERMARDQ5T6L9 678 aa18.02■□□□□ 0.48
SSB-206ENST00000461708 AFMIDQ63HM1 303 aa18.02■□□□□ 0.48
SSB-206ENST00000461708 ESRP1Q6NXG1 681 aaKnown RBP18.02■□□□□ 0.48
SSB-206ENST00000461708 FNIP1Q8TF40 1166 aa18.02■□□□□ 0.48
SSB-206ENST00000461708 SCG3Q8WXD2 468 aaKnown RBP18.02■□□□□ 0.48
SSB-206ENST00000461708 EXOC2Q96KP1 924 aa18.02■□□□□ 0.48
SSB-206ENST00000461708 DPH1Q9BZG8 443 aa18.02■□□□□ 0.48
SSB-206ENST00000461708 CLPBQ9H078 707 aa18.02■□□□□ 0.48
SSB-206ENST00000461708 PADI4Q9UM07 663 aa18.02■□□□□ 0.48
SSB-206ENST00000461708 AP4E1Q9UPM8 1137 aa18.02■□□□□ 0.48
SSB-206ENST00000461708 ATP8A1Q9Y2Q0 1164 aa18.02■□□□□ 0.48
SSB-206ENST00000461708 AHCTF1Q8WYP5 2266 aa18.02■□□□□ 0.47
SSB-206ENST00000461708 COL6A6A6NMZ7 2263 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms