RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 GPATCH2LQ9NWQ4 482 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 CWC15Q9P013 229 aaKnown RBP13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 IL17BQ9UHF5 180 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 U3KQA8 63 aa13.87□□□□□ -0.19
SCAMP4-206ENST00000460767 K7ERQ8 282 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 MYO1FO00160 1098 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 MCF2LO15068 1137 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 AKR1B10O60218 316 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 PRPSAP2O60256 369 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 PROSCO94903 275 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 IL1BP01584 269 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 NTRK1P04629 796 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 RARAP10276 462 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 EPHB2P29323 1055 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 ETFBP38117 255 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 SERPINH1P50454 418 aaKnown RBP13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 KRT83P78385 493 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 DLG2Q15700 870 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 FAM46CQ5VWP2 391 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 RWDD4Q6NW29 188 aaKnown RBP13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 NEK5Q6P3R8 708 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 POLNQ7Z5Q5 900 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 DSG4Q86SJ6 1040 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 ARHGAP12Q8IWW6 846 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 CCDC170Q8IYT3 715 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 OR2A12Q8NGT7 310 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 CTNNBL1Q8WYA6 563 aaPredicted RBP13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 ISG20Q96AZ6 181 aaKnown RBP13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 KLHDC7BQ96G42 594 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 APOLD1Q96LR9 279 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 CEP44Q9C0F1 390 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 PDFQ9HBH1 243 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 GPR27Q9NS67 375 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 PCSK1NQ9UHG2 260 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 DNAI1Q9UI46 699 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 SARDHQ9UL12 918 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 PPM1HQ9ULR3 514 aa13.86□□□□□ -0.19
SCAMP4-206ENST00000460767 NEMP2A6NFY4 417 aa13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 RNF103O00237 685 aa13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 KDELR3O43731 214 aa13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 RAMP2O60895 175 aa13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 CTSLP07711 333 aa13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 NNMTP40261 264 aa13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 NUMBP49757 651 aa13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 NDST2P52849 883 aa13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 TAS2R40P59535 323 aa13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 TSR1Q2NL82 804 aaKnown RBP13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 PARP15Q460N3 678 aa13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 RFX8Q6ZV50 586 aa13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 NPWQ8N729 165 aa13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 SLC35G2Q8TBE7 412 aa13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 PRR11Q96HE9 360 aaPredicted RBP13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 DHX35Q9H5Z1 703 aaKnown RBP13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 CATSPERBQ9H7T0 1116 aa13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 ATP13A1Q9HD20 1204 aa13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 UCKL1Q9NWZ5 548 aa13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 NCKIPSDQ9NZQ3 722 aa13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 LCMT1Q9UIC8 334 aa13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 SLC25A13Q9UJS0 675 aa13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 SATB2Q9UPW6 733 aa13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 REXO2Q9Y3B8 237 aaKnown RBP13.85□□□□□ -0.19
SCAMP4-206ENST00000460767 A0A1W2PNU3 283 aaPredicted RBP13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 PYCARD-AS1I3L0S3 204 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 SCAMP1O15126 338 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 CREB3O43889 395 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 TCEA3O75764 348 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 THEGLP0DJG4 465 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 DESP17661 470 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 ERCC2P18074 760 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 RBMS1P29558 406 aaKnown RBP13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 TPI1P60174 286 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 SERINC3Q13530 473 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 POLD3Q15054 466 aaPredicted RBP13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 RETSATQ6NUM9 610 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 C22orf39Q6P5X5 142 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 LINGO4Q6UY18 593 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 CCDC81Q6ZN84 652 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 Q6ZVU0 165 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 TPCN2Q8NHX9 752 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 OR8D1Q8WZ84 308 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 FAF2Q96CS3 445 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 HMCESQ96FZ2 354 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 CSPG4P5Q96PW8 444 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 ANP32EQ9BTT0 268 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 DEF6Q9H4E7 631 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 PCDH18Q9HCL0 1135 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 STARD5Q9NSY2 213 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 RCOR3Q9P2K3 495 aaPredicted RBP13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 HEMK1Q9Y5R4 338 aaPredicted RBP13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 ACTL7AQ9Y615 435 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 PTPN13Q12923 2485 aa13.84□□□□□ -0.19
SCAMP4-206ENST00000460767 DOCK9Q9BZ29 2069 aa13.83□□□□□ -0.2
SCAMP4-206ENST00000460767 ZSCAN5CA6NGD5 496 aaPredicted RBP13.83□□□□□ -0.2
SCAMP4-206ENST00000460767 RASA4BC9J798 803 aa13.83□□□□□ -0.2
SCAMP4-206ENST00000460767 C1QTNF3-AMACRE9PGA6 284 aa13.83□□□□□ -0.2
SCAMP4-206ENST00000460767 EEF2KO00418 725 aaKnown RBP13.83□□□□□ -0.2
SCAMP4-206ENST00000460767 FFAR2O15552 330 aa13.83□□□□□ -0.2
SCAMP4-206ENST00000460767 RASA4O43374 803 aa13.83□□□□□ -0.2
SCAMP4-206ENST00000460767 ITGB2P05107 769 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms