RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 IFNLR1Q8IU57 520 aaPredicted RBP11.73□□□□□ -0.53
NPHP4-204ENST00000460696 ABTB1Q969K4 478 aaPredicted RBP11.73□□□□□ -0.53
NPHP4-204ENST00000460696 PAAF1Q9BRP4 392 aa11.73□□□□□ -0.53
NPHP4-204ENST00000460696 STN1Q9H668 368 aaKnown RBP11.73□□□□□ -0.53
NPHP4-204ENST00000460696 EIF2B3Q9NR50 452 aaKnown RBP11.73□□□□□ -0.53
NPHP4-204ENST00000460696 MRGBPQ9NV56 204 aa11.73□□□□□ -0.53
NPHP4-204ENST00000460696 TAS2R13Q9NYV9 303 aa11.73□□□□□ -0.53
NPHP4-204ENST00000460696 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.73□□□□□ -0.53
NPHP4-204ENST00000460696 CRLS1Q9UJA2 301 aa11.73□□□□□ -0.53
NPHP4-204ENST00000460696 RAD54BQ9Y620 910 aa11.73□□□□□ -0.53
NPHP4-204ENST00000460696 MYADML2A6NDP7 307 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 TMEM114B3SHH9 223 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 BTN3A1O00481 513 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 PEX1O43933 1283 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 TLR5O60602 858 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 KATNA1O75449 491 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 GUCA1CO95843 209 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 TBX18O95935 607 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 OAS1P00973 400 aaKnown RBP11.72□□□□□ -0.53
NPHP4-204ENST00000460696 AMHP03971 560 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 ALDOAP04075 364 aaKnown RBP11.72□□□□□ -0.53
NPHP4-204ENST00000460696 PBX3P40426 434 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 RHOAP61586 193 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 PPIDQ08752 370 aaKnown RBP11.72□□□□□ -0.53
NPHP4-204ENST00000460696 NFYCQ13952 458 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 PLD6Q8N2A8 252 aaKnown RBP11.72□□□□□ -0.53
NPHP4-204ENST00000460696 TRPC4APQ8TEL6 797 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 NMD3Q96D46 503 aaKnown RBP11.72□□□□□ -0.53
NPHP4-204ENST00000460696 TSPAN18Q96SJ8 248 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 AGO3Q9H9G7 860 aaKnown RBP11.72□□□□□ -0.53
NPHP4-204ENST00000460696 FLRT1Q9NZU1 646 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 WARS2Q9UGM6 360 aaKnown RBP11.72□□□□□ -0.53
NPHP4-204ENST00000460696 LNPEPQ9UIQ6 1025 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 TTC28Q96AY4 2481 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 A0A087X1B8 175 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 ARHGAP10A1A4S6 786 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 SAC3D1A6NKF1 404 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 BHMG1C9JSJ3 638 aaPredicted RBP11.72□□□□□ -0.53
NPHP4-204ENST00000460696 MAGEC1O60732 1142 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 AKT1P31749 480 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 DUSP4Q13115 394 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 ANKS6Q68DC2 871 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 ZBTB49Q6ZSB9 765 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 TMCO2Q7Z6W1 182 aaPredicted RBP11.72□□□□□ -0.53
NPHP4-204ENST00000460696 SPDYE1Q8NFV5 336 aaPredicted RBP11.72□□□□□ -0.53
NPHP4-204ENST00000460696 B3GALT6Q96L58 329 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 TBATAQ96M53 351 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 ECSITQ9BQ95 431 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 EBF2Q9HAK2 575 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 BPIFA1Q9NP55 256 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 PAPOLBQ9NRJ5 636 aaKnown RBP11.72□□□□□ -0.53
NPHP4-204ENST00000460696 UBA2Q9UBT2 640 aaPredicted RBP11.72□□□□□ -0.53
NPHP4-204ENST00000460696 MSRAQ9UJ68 235 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 PCDHB12Q9Y5F1 795 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 RGS4P49798 205 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 CLCN5P51795 746 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 SLC9B1Q4ZJI4 515 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 TNFAIP8L3Q5GJ75 292 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 DDI1Q8WTU0 396 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 NTAN1Q96AB6 310 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 HAUS8Q9BT25 410 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 CCDC90BQ9GZT6 254 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 RIC8BQ9NVN3 520 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 CDH22Q9UJ99 828 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 ORC6Q9Y5N6 252 aa11.72□□□□□ -0.53
NPHP4-204ENST00000460696 GPR32O75388 356 aa11.71□□□□□ -0.53
NPHP4-204ENST00000460696 CLPTM1O96005 669 aa11.71□□□□□ -0.53
NPHP4-204ENST00000460696 CCNCP24863 283 aa11.71□□□□□ -0.53
NPHP4-204ENST00000460696 LSM12Q3MHD2 195 aaKnown RBP11.71□□□□□ -0.53
NPHP4-204ENST00000460696 GDF6Q6KF10 455 aaPredicted RBP11.71□□□□□ -0.53
NPHP4-204ENST00000460696 GPRIN1Q7Z2K8 1008 aa11.71□□□□□ -0.53
NPHP4-204ENST00000460696 SIRPGQ9P1W8 387 aa11.71□□□□□ -0.53
NPHP4-204ENST00000460696 LSM7Q9UK45 103 aaKnown RBP11.71□□□□□ -0.53
NPHP4-204ENST00000460696 BTRCQ9Y297 605 aa11.71□□□□□ -0.53
NPHP4-204ENST00000460696 PGM3O95394 542 aa11.71□□□□□ -0.53
NPHP4-204ENST00000460696 FGBP02675 491 aa11.71□□□□□ -0.53
NPHP4-204ENST00000460696 PSMC3P17980 439 aa11.71□□□□□ -0.53
NPHP4-204ENST00000460696 LRPAP1P30533 357 aa11.71□□□□□ -0.53
NPHP4-204ENST00000460696 PSME3P61289 254 aa11.71□□□□□ -0.53
NPHP4-204ENST00000460696 GPR158Q5T848 1215 aa11.71□□□□□ -0.53
NPHP4-204ENST00000460696 ARHGAP36Q6ZRI8 547 aa11.71□□□□□ -0.53
NPHP4-204ENST00000460696 GK5Q6ZS86 529 aa11.71□□□□□ -0.53
NPHP4-204ENST00000460696 CLEC4FQ8N1N0 589 aa11.71□□□□□ -0.53
NPHP4-204ENST00000460696 FAM156AQ8NDB6 213 aa11.71□□□□□ -0.53
NPHP4-204ENST00000460696 PSMG2Q969U7 264 aa11.71□□□□□ -0.53
NPHP4-204ENST00000460696 ZNF570Q96NI8 536 aa11.71□□□□□ -0.53
NPHP4-204ENST00000460696 THUMPD3Q9BV44 507 aaKnown RBP11.71□□□□□ -0.53
NPHP4-204ENST00000460696 TRIM54Q9BYV2 358 aa11.71□□□□□ -0.53
NPHP4-204ENST00000460696 CATSPERZQ9NTU4 200 aa11.71□□□□□ -0.53
NPHP4-204ENST00000460696 SEPT3Q9UH03 358 aa11.71□□□□□ -0.53
NPHP4-204ENST00000460696 H7C4K7 107 aa11.71□□□□□ -0.54
NPHP4-204ENST00000460696 KLF11O14901 512 aa11.71□□□□□ -0.54
NPHP4-204ENST00000460696 MATN3O15232 486 aa11.71□□□□□ -0.54
NPHP4-204ENST00000460696 TP73O15350 636 aa11.71□□□□□ -0.54
NPHP4-204ENST00000460696 CTNNB1P35222 781 aa11.71□□□□□ -0.54
NPHP4-204ENST00000460696 ATP5C1P36542 298 aaKnown RBP11.71□□□□□ -0.54
NPHP4-204ENST00000460696 CDK18Q07002 472 aa11.71□□□□□ -0.54
NPHP4-204ENST00000460696 DENND1CQ8IV53 801 aa11.71□□□□□ -0.54
NPHP4-204ENST00000460696 PHTF2Q8N3S3 785 aa11.71□□□□□ -0.54
NPHP4-204ENST00000460696 RP9Q8TA86 221 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms