RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 HMGB4Q8WW32 186 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 RMDN1Q96DB5 314 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 FEM1CQ96JP0 617 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 MRGPRX1Q96LB2 322 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 FAM129BQ96TA1 746 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 FAM129AQ9BZQ8 928 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 BTBD1Q9H0C5 482 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 TSPYL1Q9H0U9 437 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 PCED1AQ9H1Q7 454 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 PABPC3Q9H361 631 aaKnown RBP11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 TRABDQ9H4I3 376 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 EPHX3Q9H6B9 360 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 L2HGDHQ9H9P8 463 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 SGK2Q9HBY8 427 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 EIF2B3Q9NR50 452 aaKnown RBP11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 FBXL12Q9NXK8 326 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 DLGAP2Q9P1A6 1054 aa11.12□□□□□ -0.63
SMNDC1-203ENST00000460483 C16orf96A6NNT2 1141 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 AXIN1O15169 862 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 FANCGO15287 622 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 HTRA2O43464 458 aaPredicted RBP11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 TSPAN6O43657 245 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 NDUFS2O75306 463 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 PMPCBO75439 489 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 NDST3O95803 873 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 CPP00450 1065 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 FGF1P05230 155 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 APRTP07741 180 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 ITIH2P19823 946 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 MCM3P25205 808 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 DSC2Q02487 901 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 SEMA5AQ13591 1074 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 PTK6Q13882 451 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 ARHGEF7Q14155 803 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 UGP2Q16851 508 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 SPDYCQ5MJ68 293 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 ZC3H14Q6PJT7 736 aaKnown RBP11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 HOOK3Q86VS8 718 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 LONP2Q86WA8 852 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 RASSF3Q86WH2 238 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 CAMK1DQ8IU85 385 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 HDDC3Q8N4P3 179 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 MMGT1Q8N4V1 131 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 DNAAF3Q8N9W5 541 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 ARRDC2Q8TBH0 407 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 KLHL32Q96NJ5 620 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 RBM15Q96T37 977 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 MLPHQ9BV36 600 aaPredicted RBP11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 C1QTNF7Q9BXJ2 289 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 TDRD1Q9BXT4 1180 aaKnown RBP11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 CEP41Q9BYV8 373 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 ITM2CQ9NQX7 267 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 RAD18Q9NS91 495 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 HCN2Q9UL51 889 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 PCDHB9Q9Y5E1 797 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 WASF2Q9Y6W5 498 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 C5orf42Q9H799 3197 aa11.11□□□□□ -0.63
SMNDC1-203ENST00000460483 EFCAB8A8MWE9 144 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 ANKRD66B4E2M5 251 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 PDE2AO00408 941 aaPredicted RBP11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 PI15O43692 258 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 AP1G1O43747 822 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 PGLSO95336 258 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 AP2A1O95782 977 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 TUBBP07437 444 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 ZNF30P17039 623 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 GABRG2P18507 467 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 NDUFV2P19404 249 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 PSMB4P28070 264 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 RPL22P35268 128 aaKnown RBP11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 DPP6P42658 865 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 COPAP53621 1224 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 DRG2P55039 364 aaKnown RBP11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 GDF10P55107 478 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 WNT3AP56704 352 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 SKOR1P84550 965 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 CDH17Q12864 832 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 GAS6Q14393 721 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 PCSK7Q16549 785 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 ZDHHC20Q5W0Z9 365 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 KIAA1211LQ6NV74 962 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 TTC27Q6P3X3 843 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 JAMLQ86YT9 394 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 PPIL6Q8IXY8 311 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 PGBD5Q8N414 524 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 CHST14Q8NCH0 376 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 IPMKQ8NFU5 416 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 OR6K2Q8NGY2 324 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 FOXJ1Q92949 421 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 ECHDC3Q96DC8 303 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 SCRN2Q96FV2 425 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 SNF8Q96H20 258 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 ERP44Q9BS26 406 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 MKRN2Q9H000 416 aaKnown RBP11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 CDH19Q9H159 772 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 KCNH6Q9H252 994 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 ETNK1Q9HBU6 452 aa11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 XAB2Q9HCS7 855 aaKnown RBP11.1□□□□□ -0.63
SMNDC1-203ENST00000460483 PREBQ9HCU5 417 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms