RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 CNDP2Q96KP4 475 aaKnown RBP16.65■□□□□ 0.26
SHANK2-213ENST00000460048 NSMCE3Q96MG7 304 aa16.65■□□□□ 0.26
SHANK2-213ENST00000460048 DEF6Q9H4E7 631 aa16.65■□□□□ 0.26
SHANK2-213ENST00000460048 MYLKQ15746 1914 aa16.64■□□□□ 0.26
SHANK2-213ENST00000460048 CEP295Q9C0D2 2601 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 GOLGA8CPA6NN73 597 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 ENC1O14682 589 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 FPGTO14772 594 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 AKR1B10O60218 316 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 SDC3O75056 442 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 TM7SF2O76062 418 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 LDOC1O95751 146 aaPredicted RBP16.64■□□□□ 0.25
SHANK2-213ENST00000460048 SERPINB6P35237 376 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 RABIFP47224 123 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 RENBPP51606 427 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 TAS2R40P59535 323 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 ELP6Q0PNE2 266 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 MMRN1Q13201 1228 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 DPYSL3Q14195 570 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 FZD2Q14332 565 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 KRT81Q14533 505 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 ST3GAL2Q16842 350 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 TSR1Q2NL82 804 aaKnown RBP16.64■□□□□ 0.25
SHANK2-213ENST00000460048 SLC25A45Q8N413 288 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 CXorf40AQ8TE69 158 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 ATP13A3Q9H7F0 1226 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 CAAP1Q9H8G2 361 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 NHEJ1Q9H9Q4 299 aaPredicted RBP16.64■□□□□ 0.25
SHANK2-213ENST00000460048 PCDH12Q9NPG4 1184 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 SEPT3Q9UH03 358 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 LCMT1Q9UIC8 334 aa16.64■□□□□ 0.25
SHANK2-213ENST00000460048 SPTY2D1-AS1A0A0U1RR47 76 aa16.63■□□□□ 0.25
SHANK2-213ENST00000460048 TRAFD1O14545 582 aaPredicted RBP16.63■□□□□ 0.25
SHANK2-213ENST00000460048 RIOK3O14730 519 aaKnown RBP16.63■□□□□ 0.25
SHANK2-213ENST00000460048 PIAS2O75928 621 aa16.63■□□□□ 0.25
SHANK2-213ENST00000460048 CR2P20023 1033 aa16.63■□□□□ 0.25
SHANK2-213ENST00000460048 XPAP23025 273 aaPredicted RBP16.63■□□□□ 0.25
SHANK2-213ENST00000460048 DGKAP23743 735 aa16.63■□□□□ 0.25
SHANK2-213ENST00000460048 SERPINA4P29622 427 aa16.63■□□□□ 0.25
SHANK2-213ENST00000460048 MAN1A1P33908 653 aa16.63■□□□□ 0.25
SHANK2-213ENST00000460048 IGFALSP35858 605 aa16.63■□□□□ 0.25
SHANK2-213ENST00000460048 SSR1P43307 286 aaKnown RBP16.63■□□□□ 0.25
SHANK2-213ENST00000460048 AP1S1P61966 158 aa16.63■□□□□ 0.25
SHANK2-213ENST00000460048 BCL2L1Q07817 233 aa16.63■□□□□ 0.25
SHANK2-213ENST00000460048 TPRG1LQ5T0D9 272 aa16.63■□□□□ 0.25
SHANK2-213ENST00000460048 KDM7AQ6ZMT4 941 aa16.63■□□□□ 0.25
SHANK2-213ENST00000460048 TMPRSS7Q7RTY8 843 aa16.63■□□□□ 0.25
SHANK2-213ENST00000460048 CNGA4Q8IV77 575 aa16.63■□□□□ 0.25
SHANK2-213ENST00000460048 PGBD5Q8N414 524 aa16.63■□□□□ 0.25
SHANK2-213ENST00000460048 TP53I13Q8NBR0 393 aaPredicted RBP16.63■□□□□ 0.25
SHANK2-213ENST00000460048 CCDC42Q96M95 316 aa16.63■□□□□ 0.25
SHANK2-213ENST00000460048 WRAP53Q9BUR4 548 aaKnown RBP16.63■□□□□ 0.25
SHANK2-213ENST00000460048 SPTLC3Q9NUV7 552 aa16.63■□□□□ 0.25
SHANK2-213ENST00000460048 UCKL1Q9NWZ5 548 aa16.63■□□□□ 0.25
SHANK2-213ENST00000460048 PCDHGA1Q9Y5H4 931 aa16.63■□□□□ 0.25
SHANK2-213ENST00000460048 CACNA1BQ00975 2339 aa16.62■□□□□ 0.25
SHANK2-213ENST00000460048 AKR1B15C9JRZ8 316 aaPredicted RBP16.62■□□□□ 0.25
SHANK2-213ENST00000460048 MTA2O94776 668 aa16.62■□□□□ 0.25
SHANK2-213ENST00000460048 GIMD1P0DJR0 217 aa16.62■□□□□ 0.25
SHANK2-213ENST00000460048 HSPA9P38646 679 aaKnown RBP16.62■□□□□ 0.25
SHANK2-213ENST00000460048 MMP12P39900 470 aa16.62■□□□□ 0.25
SHANK2-213ENST00000460048 SCNN1BP51168 640 aa16.62■□□□□ 0.25
SHANK2-213ENST00000460048 DNAJC3Q13217 504 aa16.62■□□□□ 0.25
SHANK2-213ENST00000460048 PAFAH1B3Q15102 231 aaKnown RBP16.62■□□□□ 0.25
SHANK2-213ENST00000460048 AGERQ15109 404 aa16.62■□□□□ 0.25
SHANK2-213ENST00000460048 PDK2Q15119 407 aa16.62■□□□□ 0.25
SHANK2-213ENST00000460048 NCBP2-AS2Q69YL0 99 aa16.62■□□□□ 0.25
SHANK2-213ENST00000460048 CCNI2Q6ZMN8 369 aaPredicted RBP16.62■□□□□ 0.25
SHANK2-213ENST00000460048 ATPAF2Q8N5M1 289 aa16.62■□□□□ 0.25
SHANK2-213ENST00000460048 KDF1Q8NAX2 398 aaPredicted RBP16.62■□□□□ 0.25
SHANK2-213ENST00000460048 PCDH19Q8TAB3 1148 aa16.62■□□□□ 0.25
SHANK2-213ENST00000460048 SLC35G2Q8TBE7 412 aa16.62■□□□□ 0.25
SHANK2-213ENST00000460048 FAF2Q96CS3 445 aa16.62■□□□□ 0.25
SHANK2-213ENST00000460048 ZNF670Q9BS34 389 aa16.62■□□□□ 0.25
SHANK2-213ENST00000460048 C1QTNF7Q9BXJ2 289 aa16.62■□□□□ 0.25
SHANK2-213ENST00000460048 MBNL1Q9NR56 388 aaKnown RBP16.62■□□□□ 0.25
SHANK2-213ENST00000460048 ATP8A1Q9Y2Q0 1164 aa16.62■□□□□ 0.25
SHANK2-213ENST00000460048 GOLGA4Q13439 2230 aaKnown RBP16.61■□□□□ 0.25
SHANK2-213ENST00000460048 CFAP69A5D8W1 941 aa16.61■□□□□ 0.25
SHANK2-213ENST00000460048 TMEM8BA6NDV4 472 aa16.61■□□□□ 0.25
SHANK2-213ENST00000460048 TRIM38O00635 465 aa16.61■□□□□ 0.25
SHANK2-213ENST00000460048 TOR1BO14657 336 aa16.61■□□□□ 0.25
SHANK2-213ENST00000460048 MFSD11O43934 449 aa16.61■□□□□ 0.25
SHANK2-213ENST00000460048 CSF2P04141 144 aa16.61■□□□□ 0.25
SHANK2-213ENST00000460048 KRT7P08729 469 aa16.61■□□□□ 0.25
SHANK2-213ENST00000460048 C1SP09871 688 aa16.61■□□□□ 0.25
SHANK2-213ENST00000460048 C6P13671 934 aa16.61■□□□□ 0.25
SHANK2-213ENST00000460048 NME1P15531 152 aaKnown RBP16.61■□□□□ 0.25
SHANK2-213ENST00000460048 GJC1P36383 396 aa16.61■□□□□ 0.25
SHANK2-213ENST00000460048 ACADVLP49748 655 aa16.61■□□□□ 0.25
SHANK2-213ENST00000460048 PDE1CQ14123 709 aaPredicted RBP16.61■□□□□ 0.25
SHANK2-213ENST00000460048 ZNF235Q14590 738 aa16.61■□□□□ 0.25
SHANK2-213ENST00000460048 SMAD1Q15797 465 aaKnown RBP16.61■□□□□ 0.25
SHANK2-213ENST00000460048 PROX2Q3B8N5 592 aa16.61■□□□□ 0.25
SHANK2-213ENST00000460048 ANKRD20A8PQ5CZ79 823 aa16.61■□□□□ 0.25
SHANK2-213ENST00000460048 ZNF542PQ5EBM4 170 aa16.61■□□□□ 0.25
SHANK2-213ENST00000460048 CFAP58Q5T655 872 aa16.61■□□□□ 0.25
SHANK2-213ENST00000460048 ERAP2Q6P179 960 aa16.61■□□□□ 0.25
SHANK2-213ENST00000460048 PARGQ86W56 976 aa16.61■□□□□ 0.25
SHANK2-213ENST00000460048 LRRC49Q8IUZ0 686 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms