RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.91□□□□□ -0.984e-6■■■■■ 48.1
HDAC3-202ENST00000459727 AZIN2Q96A70 460 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 PBXIP1Q96AQ6 731 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 NXNL1Q96CM4 212 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 DUS3LQ96G46 650 aaKnown RBP8.91□□□□□ -0.98
HDAC3-202ENST00000459727 FEM1CQ96JP0 617 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 MRGPRX2Q96LB1 330 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 CCT7Q99832 543 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 PTPN18Q99952 460 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 FTHL17Q9BXU8 183 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 RHOBTB2Q9BYZ6 727 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 NUF2Q9BZD4 464 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 POMKQ9H5K3 350 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 SPAG4Q9NPE6 437 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 GTSE1Q9NYZ3 720 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 FLRT1Q9NZU1 646 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 PCDH10Q9P2E7 1040 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 SARDHQ9UL12 918 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 PADI4Q9UM07 663 aa8.91□□□□□ -0.98
HDAC3-202ENST00000459727 TIMM13Q9Y5L4 95 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-202ENST00000459727 IGLV3-10A0A075B6K4 115 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 TYW5A2RUC4 315 aaKnown RBP8.9□□□□□ -0.98
HDAC3-202ENST00000459727 OR6C75A6NL08 312 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 H3BNX3 289 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 SDHDO14521 159 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 NEMP1O14524 444 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 TNFRSF10BO14763 440 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 UBDO15205 165 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 PMPCBO75439 489 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 OAZ2O95190 189 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 CELF2O95319 508 aaKnown RBP8.9□□□□□ -0.98
HDAC3-202ENST00000459727 PGK1P00558 417 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 CHRNA1P02708 482 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 CAPNS1P04632 268 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 C8BP07358 591 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 IMPDH1P20839 514 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 SAT1P21673 171 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 CES1P23141 567 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 ARNTP27540 789 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 CST5P28325 142 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-202ENST00000459727 PEX2P28328 305 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 EPHA3P29320 983 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 CDC25CP30307 473 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 PBX3P40426 434 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 PEX19P40855 299 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 TBX4P57082 545 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 MPP1Q00013 466 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 ACVR1Q04771 509 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 FOXM1Q08050 763 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 GRIK2Q13002 908 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 OLIG2Q13516 323 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 PDK3Q15120 406 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 TRIP4Q15650 581 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-202ENST00000459727 PDCD2Q16342 344 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-202ENST00000459727 LIN52Q52LA3 116 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 COQ5Q5HYK3 327 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 TCHHL1Q5QJ38 904 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-202ENST00000459727 RASIP1Q5U651 963 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 C17orf99Q6UX52 265 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 CILP2Q8IUL8 1156 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 DENND6AQ8IWF6 608 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 LSMEM2Q8N112 164 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 AHI1Q8N157 1196 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 PCSK9Q8NBP7 692 aaKnown RBP8.9□□□□□ -0.98
HDAC3-202ENST00000459727 C3orf58Q8NDZ4 430 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 OR10T2Q8NGX3 314 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 SPATA22Q8NHS9 363 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 RHEBL1Q8TAI7 183 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 MAPK15Q8TD08 544 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 USP33Q8TEY7 942 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 C2orf15Q8WU43 125 aaKnown RBP8.9□□□□□ -0.98
HDAC3-202ENST00000459727 HEXDCQ8WVB3 486 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 TADA1Q96BN2 335 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 RCN3Q96D15 328 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 DCUN1D1Q96GG9 259 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 SLC39A13Q96H72 371 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 CDRT15Q96T59 188 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 OMDQ99983 421 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 HAUS8Q9BT25 410 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 MRPS26Q9BYN8 205 aaKnown RBP8.9□□□□□ -0.98
HDAC3-202ENST00000459727 POLR1EQ9GZS1 481 aaKnown RBP8.9□□□□□ -0.98
HDAC3-202ENST00000459727 ZCWPW1Q9H0M4 648 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 SUDS3Q9H7L9 328 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-202ENST00000459727 SYTL2Q9HCH5 934 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 PRDM5Q9NQX1 630 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-202ENST00000459727 MAN1C1Q9NR34 630 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 IGSF5Q9NSI5 407 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 RNF19AQ9NV58 838 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 TMEM30AQ9NV96 361 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 INTS10Q9NVR2 710 aaKnown RBP8.9□□□□□ -0.98
HDAC3-202ENST00000459727 UBP1Q9NZI7 540 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 ZDHHC2Q9UIJ5 367 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 PADI3Q9ULW8 664 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 VWA7Q9Y334 891 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 HS3ST4Q9Y661 456 aa8.9□□□□□ -0.98
HDAC3-202ENST00000459727 COPG1Q9Y678 874 aaKnown RBP8.9□□□□□ -0.98
HDAC3-202ENST00000459727 TRIP11Q15643 1979 aa8.9□□□□□ -0.99
HDAC3-202ENST00000459727 PRSS51A0A1B0GVH4 220 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 E2F8A0AVK6 867 aa8.89□□□□□ -0.99
HDAC3-202ENST00000459727 ARHGAP10A1A4S6 786 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms