RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 TLR4O00206 839 aa16.3■□□□□ 0.2
CD28-203ENST00000458610 TM4SF5O14894 197 aa16.3■□□□□ 0.2
CD28-203ENST00000458610 CCNB1P14635 433 aa16.3■□□□□ 0.2
CD28-203ENST00000458610 TGM2P21980 687 aa16.3■□□□□ 0.2
CD28-203ENST00000458610 CA4P22748 312 aa16.3■□□□□ 0.2
CD28-203ENST00000458610 ABL2P42684 1182 aa16.3■□□□□ 0.2
CD28-203ENST00000458610 RGRP47804 291 aa16.3■□□□□ 0.2
CD28-203ENST00000458610 PPIDQ08752 370 aaKnown RBP16.3■□□□□ 0.2
CD28-203ENST00000458610 TAZQ16635 292 aa16.3■□□□□ 0.2
CD28-203ENST00000458610 TMEM52BQ4KMG9 183 aa16.3■□□□□ 0.2
CD28-203ENST00000458610 DCP2Q8IU60 420 aaKnown RBP16.3■□□□□ 0.2
CD28-203ENST00000458610 OXR1Q8N573 874 aa16.3■□□□□ 0.2
CD28-203ENST00000458610 LENG8Q96PV6 779 aaPredicted RBP16.3■□□□□ 0.2
CD28-203ENST00000458610 NT5MQ9NPB1 228 aa16.3■□□□□ 0.2
CD28-203ENST00000458610 GDF3Q9NR23 364 aa16.3■□□□□ 0.2
CD28-203ENST00000458610 SALL4Q9UJQ4 1053 aa16.3■□□□□ 0.2
CD28-203ENST00000458610 SNX11Q9Y5W9 270 aa16.3■□□□□ 0.2
CD28-203ENST00000458610 ZNF292O60281 2723 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 A0A1W2PR77 199 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 MACROD2A1Z1Q3 448 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 DCDC2BA2VCK2 349 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 CFAP69A5D8W1 941 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 IGLON5A6NGN9 336 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 MUSKO15146 869 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 YKT6O15498 198 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 KRT86O43790 486 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 CST8O60676 142 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 TM7SF2O76062 418 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 PAK4O96013 591 aaPredicted RBP16.29■□□□□ 0.2
CD28-203ENST00000458610 CR2P20023 1033 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 CSRP1P21291 193 aaKnown RBP16.29■□□□□ 0.2
CD28-203ENST00000458610 CTNNA2P26232 953 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 CTNNA1P35221 906 aaKnown RBP16.29■□□□□ 0.2
CD28-203ENST00000458610 CTSKP43235 329 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 RWDD2BP57060 319 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 DYNLT1P63172 113 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 AP1B1Q10567 949 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 SLC10A2Q12908 348 aaPredicted RBP16.29■□□□□ 0.2
CD28-203ENST00000458610 PPP2R5EQ16537 467 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 SEL1L3Q68CR1 1132 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 PEX26Q7Z412 305 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 UBL4BQ8N7F7 174 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 SPOCK2Q92563 424 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 P3H4Q92791 437 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 KLK6Q92876 244 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 VOPP1Q96AW1 172 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 ECHDC3Q96DC8 303 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 DESI2Q9BSY9 194 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 GOLPH3Q9H4A6 298 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 ERVMER34-1Q9H9K5 563 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 NOD2Q9HC29 1040 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 ZFR2Q9UPR6 939 aaKnown RBP16.29■□□□□ 0.2
CD28-203ENST00000458610 EFR3BQ9Y2G0 817 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 ATP8A1Q9Y2Q0 1164 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 PCDHGB2Q9Y5G2 931 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 SLCO1B1Q9Y6L6 691 aa16.29■□□□□ 0.2
CD28-203ENST00000458610 NYNRINQ9P2P1 1898 aaKnown RBP16.29■□□□□ 0.2
CD28-203ENST00000458610 PI4KAP42356 2102 aa16.28■□□□□ 0.2
CD28-203ENST00000458610 MIF4GDA9UHW6 222 aaKnown RBP16.28■□□□□ 0.2
CD28-203ENST00000458610 RIOK3O14730 519 aaKnown RBP16.28■□□□□ 0.2
CD28-203ENST00000458610 FPGTO14772 594 aa16.28■□□□□ 0.2
CD28-203ENST00000458610 MTSS1O43312 755 aa16.28■□□□□ 0.2
CD28-203ENST00000458610 MAP3K6O95382 1288 aa16.28■□□□□ 0.2
CD28-203ENST00000458610 PRLRP16471 622 aa16.28■□□□□ 0.2
CD28-203ENST00000458610 ARRB1P49407 418 aaPredicted RBP16.28■□□□□ 0.2
CD28-203ENST00000458610 FAM193AP78312 1265 aa16.28■□□□□ 0.2
CD28-203ENST00000458610 FOXK2Q01167 660 aa16.28■□□□□ 0.2
CD28-203ENST00000458610 BNC1Q01954 994 aa16.28■□□□□ 0.2
CD28-203ENST00000458610 ZNF423Q2M1K9 1284 aa16.28■□□□□ 0.2
CD28-203ENST00000458610 CCDC181Q5TID7 509 aa16.28■□□□□ 0.2
CD28-203ENST00000458610 KAZNQ674X7 775 aa16.28■□□□□ 0.2
CD28-203ENST00000458610 LRRC8AQ8IWT6 810 aa16.28■□□□□ 0.2
CD28-203ENST00000458610 PGBD5Q8N414 524 aa16.28■□□□□ 0.2
CD28-203ENST00000458610 TMEM145Q8NBT3 493 aa16.28■□□□□ 0.2
CD28-203ENST00000458610 DENND6BQ8NEG7 585 aa16.28■□□□□ 0.2
CD28-203ENST00000458610 SEMA3CQ99985 751 aa16.28■□□□□ 0.2
CD28-203ENST00000458610 FERMT1Q9BQL6 677 aa16.28■□□□□ 0.2
CD28-203ENST00000458610 PCDH12Q9NPG4 1184 aa16.28■□□□□ 0.2
CD28-203ENST00000458610 TM7SF3Q9NS93 570 aa16.28■□□□□ 0.2
CD28-203ENST00000458610 PHTF1Q9UMS5 762 aa16.28■□□□□ 0.2
CD28-203ENST00000458610 ADGRG1Q9Y653 693 aa16.28■□□□□ 0.2
CD28-203ENST00000458610 VPS13AQ96RL7 3174 aa16.28■□□□□ 0.2
CD28-203ENST00000458610 hCG_1818297A0A087WSY0 165 aa16.27■□□□□ 0.2
CD28-203ENST00000458610 A6NNZ2 444 aa16.27■□□□□ 0.2
CD28-203ENST00000458610 TRAFD1O14545 582 aaPredicted RBP16.27■□□□□ 0.2
CD28-203ENST00000458610 TOR1BO14657 336 aa16.27■□□□□ 0.2
CD28-203ENST00000458610 HTRA2O43464 458 aaPredicted RBP16.27■□□□□ 0.2
CD28-203ENST00000458610 MMP20O60882 483 aa16.27■□□□□ 0.2
CD28-203ENST00000458610 GJB3O75712 270 aa16.27■□□□□ 0.2
CD28-203ENST00000458610 JCHAINP01591 159 aa16.27■□□□□ 0.2
CD28-203ENST00000458610 WNT1P04628 370 aa16.27■□□□□ 0.2
CD28-203ENST00000458610 CCDC175P0C221 793 aa16.27■□□□□ 0.2
CD28-203ENST00000458610 CYP2A6P11509 494 aaPredicted RBP16.27■□□□□ 0.2
CD28-203ENST00000458610 CEACAM1P13688 526 aa16.27■□□□□ 0.2
CD28-203ENST00000458610 CCT8P50990 548 aa16.27■□□□□ 0.2
CD28-203ENST00000458610 NXPH1P58417 271 aa16.27■□□□□ 0.2
CD28-203ENST00000458610 MAXP61244 160 aa16.27■□□□□ 0.2
CD28-203ENST00000458610 IFI35P80217 286 aaPredicted RBP16.27■□□□□ 0.2
CD28-203ENST00000458610 INAVAQ3KP66 663 aa16.27■□□□□ 0.2
CD28-203ENST00000458610 ARMC12Q5T9G4 340 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms