RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 CCR1P32246 355 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 RPL9P32969 192 aaKnown RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 CD68P34810 354 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ADCYAP1R1P41586 468 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 GRIA2P42262 883 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 LEPRP48357 1165 aaKnown RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ACADVLP49748 655 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 PSEN2P49810 448 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 CPT1AP50416 773 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 SERPINH1P50454 418 aaKnown RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 RENBPP51606 427 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 GTF2A2P52657 109 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ATXN3P54252 364 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ADARP55265 1226 aaKnown RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 KCNK10P57789 538 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 TAS2R39P59534 338 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ATP6V0D1P61421 351 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 MPP1Q00013 466 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 NFKB2Q00653 900 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 MYBPC1Q00872 1141 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 PLOD1Q02809 727 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 CREB5Q02930 508 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 SULT2A1Q06520 285 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ITKQ08881 620 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 TMEM62Q0P6H9 643 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 EPS8Q12929 822 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 MTA1Q13330 715 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 TMED1Q13445 227 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 IRF5Q13568 498 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 IKBKEQ14164 716 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 LPIN1Q14693 890 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 MFSD10Q14728 455 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 MYLK3Q32MK0 819 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 Q3C1V9 767 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 MGAT5BQ3V5L5 792 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 XKR4Q5GH76 650 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 MTX3Q5HYI7 312 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 TECRLQ5HYJ1 363 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 COQ5Q5HYK3 327 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 RAB41Q5JT25 222 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 MARCH8Q5T0T0 291 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 TMTC4Q5T4D3 741 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 TSTD2Q5T7W7 516 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 INTS11Q5TA45 600 aaKnown RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 OTUD1Q5VV17 481 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 IL23RQ5VWK5 629 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 SYPL2Q5VXT5 272 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 WSCD1Q658N2 575 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 TMEM198Q66K66 360 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 PM20D1Q6GTS8 502 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 MRNIPQ6NTE8 343 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 TAPT1Q6NXT6 567 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 TAF2Q6P1X5 1199 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 TTC33Q6PID6 262 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ABRAXAS1Q6UWZ7 409 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 MAMDC4Q6UXC1 1216 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 HFE2Q6ZVN8 426 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 CHSY3Q70JA7 882 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 FKBP9P1Q75LS8 142 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 OTOP3Q7RTS5 596 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ERMP1Q7Z2K6 904 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 SPATA19Q7Z5L4 167 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 PLEKHH3Q7Z736 793 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 AMIGO2Q86SJ2 522 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 TAC4Q86UU9 113 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 OSTM1Q86WC4 334 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 CARM1Q86X55 608 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 PROSER1Q86XN7 944 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF354CQ86Y25 554 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 TICAM1Q8IUC6 712 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 RNF135Q8IUD6 432 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 EGFL6Q8IUX8 553 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 CHERPQ8IWX8 916 aaKnown RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 DDIASQ8IXT1 998 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 KLHDC8BQ8IXV7 354 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 COLGALT2Q8IYK4 626 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 RNF168Q8IYW5 571 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 CENPLQ8N0S6 344 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 CLYBLQ8N0X4 340 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 PELI3Q8N2H9 469 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 TMEM130Q8N3G9 435 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 PCDH20Q8N6Y1 951 aaKnown RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 RNF148Q8N7C7 305 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ATP6V0D2Q8N8Y2 350 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 TMEM102Q8N9M5 508 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 MFSD2AQ8NA29 543 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 KDM1BQ8NB78 822 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 TXNDC5Q8NBS9 432 aaKnown RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 LEMD2Q8NC56 503 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 PDPRQ8NCN5 879 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 OR6P1Q8NGX9 317 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF420Q8TAQ5 688 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 ADAM32Q8TC27 787 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 PNPT1Q8TCS8 783 aaKnown RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 SPPL2BQ8TCT7 592 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 DQX1Q8TE96 717 aaKnown RBP3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 TSPEARQ8WU66 669 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 HEXDCQ8WVB3 486 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 LRTOMTQ8WZ04 291 aa3.35□□□□□ -1.87
HMGN1P18-201ENST00000457642 SEPT8Q92599 483 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms