RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 TMEM52BQ4KMG9 183 aa18.04■□□□□ 0.48
MSH6-207ENST00000456246 CCDC157Q569K6 752 aa18.04■□□□□ 0.48
MSH6-207ENST00000456246 DHRS13Q6UX07 377 aa18.04■□□□□ 0.48
MSH6-207ENST00000456246 SRLQ86TD4 932 aa18.04■□□□□ 0.48
MSH6-207ENST00000456246 BBS5Q8N3I7 341 aa18.04■□□□□ 0.48
MSH6-207ENST00000456246 TSEN2Q8NCE0 465 aaKnown RBP18.04■□□□□ 0.48
MSH6-207ENST00000456246 ZNF564Q8TBZ8 553 aaPredicted RBP18.04■□□□□ 0.48
MSH6-207ENST00000456246 CSPG4P5Q96PW8 444 aa18.04■□□□□ 0.48
MSH6-207ENST00000456246 TSPY26PQ9H489 355 aa18.04■□□□□ 0.48
MSH6-207ENST00000456246 ZNHIT6Q9NWK9 470 aaKnown RBP18.04■□□□□ 0.48
MSH6-207ENST00000456246 DNAJC28Q9NX36 388 aa18.04■□□□□ 0.48
MSH6-207ENST00000456246 GOLGA4Q13439 2230 aaKnown RBP18.04■□□□□ 0.48
MSH6-207ENST00000456246 A0A1W2PQ67 120 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 SSU72P8A0A1W2PR75 194 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 CFAP69A5D8W1 941 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 CSF2P04141 144 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 ACP1P24666 158 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 THOP1P52888 689 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 POLR2LP62875 67 aaKnown RBP18.03■□□□□ 0.48
MSH6-207ENST00000456246 BCL2L1Q07817 233 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 PDE1CQ14123 709 aaPredicted RBP18.03■□□□□ 0.48
MSH6-207ENST00000456246 FZD2Q14332 565 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 LBRQ14739 615 aaKnown RBP18.03■□□□□ 0.48
MSH6-207ENST00000456246 SLC18A3Q16572 532 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 LRRC49Q8IUZ0 686 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 SLC25A45Q8N413 288 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 NETO2Q8NC67 525 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 OR8K1Q8NGG5 319 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 NSMCE1Q8WV22 266 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 BTN2A2Q8WVV5 523 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 CTNNBL1Q8WYA6 563 aaPredicted RBP18.03■□□□□ 0.48
MSH6-207ENST00000456246 CENPTQ96BT3 561 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 DNAJC7Q99615 494 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 DEF6Q9H4E7 631 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 CCDC86Q9H6F5 360 aaKnown RBP18.03■□□□□ 0.48
MSH6-207ENST00000456246 USP29Q9HBJ7 922 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 PCDH18Q9HCL0 1135 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 NLGN3Q9NZ94 848 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 NENFQ9UMX5 172 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 ATP8A1Q9Y2Q0 1164 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 CSNK1G3Q9Y6M4 447 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 PLXNB3Q9ULL4 1909 aa18.03■□□□□ 0.48
MSH6-207ENST00000456246 ASPMQ8IZT6 3477 aa18.02■□□□□ 0.48
MSH6-207ENST00000456246 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.02■□□□□ 0.48
MSH6-207ENST00000456246 SCAMP1O15126 338 aa18.02■□□□□ 0.48
MSH6-207ENST00000456246 SIGLEC6O43699 453 aa18.02■□□□□ 0.48
MSH6-207ENST00000456246 MMP20O60882 483 aa18.02■□□□□ 0.48
MSH6-207ENST00000456246 H2AFZP0C0S5 128 aa18.02■□□□□ 0.48
MSH6-207ENST00000456246 EIF4A3P38919 411 aaKnown RBP18.02■□□□□ 0.48
MSH6-207ENST00000456246 DNAJC3Q13217 504 aa18.02■□□□□ 0.48
MSH6-207ENST00000456246 KRT81Q14533 505 aa18.02■□□□□ 0.48
MSH6-207ENST00000456246 ZNF235Q14590 738 aa18.02■□□□□ 0.48
MSH6-207ENST00000456246 AGERQ15109 404 aa18.02■□□□□ 0.48
MSH6-207ENST00000456246 LRRC73Q5JTD7 316 aa18.02■□□□□ 0.48
MSH6-207ENST00000456246 H2AFVQ71UI9 128 aa18.02■□□□□ 0.48
MSH6-207ENST00000456246 ATPAF2Q8N5M1 289 aa18.02■□□□□ 0.48
MSH6-207ENST00000456246 PAF1Q8N7H5 531 aa18.02■□□□□ 0.48
MSH6-207ENST00000456246 ECHDC3Q96DC8 303 aa18.02■□□□□ 0.48
MSH6-207ENST00000456246 TBATAQ96M53 351 aa18.02■□□□□ 0.48
MSH6-207ENST00000456246 PCDH12Q9NPG4 1184 aa18.02■□□□□ 0.48
MSH6-207ENST00000456246 NCKIPSDQ9NZQ3 722 aa18.02■□□□□ 0.48
MSH6-207ENST00000456246 DKK4Q9UBT3 224 aa18.02■□□□□ 0.48
MSH6-207ENST00000456246 BUB1BO60566 1050 aaPredicted RBP18.01■□□□□ 0.47
MSH6-207ENST00000456246 KRT37O76014 449 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 TCF4P15884 667 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 AMPD1P23109 780 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 NFKBIAP25963 317 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 IGFALSP35858 605 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 MMP12P39900 470 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 SSR1P43307 286 aaKnown RBP18.01■□□□□ 0.47
MSH6-207ENST00000456246 RGRP47804 291 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 PEX5P50542 639 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 DUSP3P51452 185 aaPredicted RBP18.01■□□□□ 0.47
MSH6-207ENST00000456246 CDH6P55285 790 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 DAB2P98082 770 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 E2F1Q01094 437 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 LRRC14Q15048 493 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 RALGPS1Q5JS13 557 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 PROSER1Q86XN7 944 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 CAMK1DQ8IU85 385 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 CACTIN-AS1Q8N1I8 211 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 PDCD7Q8N8D1 485 aaKnown RBP18.01■□□□□ 0.47
MSH6-207ENST00000456246 FAM181AQ8N9Y4 354 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 TP53I13Q8NBR0 393 aaPredicted RBP18.01■□□□□ 0.47
MSH6-207ENST00000456246 FAM71BQ8TC56 605 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 SPOCK2Q92563 424 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 BTBD6Q96KE9 485 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 WRAP53Q9BUR4 548 aaKnown RBP18.01■□□□□ 0.47
MSH6-207ENST00000456246 UCKL1Q9NWZ5 548 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 CTTNBP2NLQ9P2B4 639 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 ACACAQ13085 2346 aa18.01■□□□□ 0.47
MSH6-207ENST00000456246 ANKRD11Q6UB99 2663 aaPredicted RBP18.01■□□□□ 0.47
MSH6-207ENST00000456246 TDRD6O60522 2096 aaKnown RBP18■□□□□ 0.47
MSH6-207ENST00000456246 TMEM110-MUSTN1A8MSY1 372 aa18■□□□□ 0.47
MSH6-207ENST00000456246 TRIM38O00635 465 aa18■□□□□ 0.47
MSH6-207ENST00000456246 FFAR2O15552 330 aa18■□□□□ 0.47
MSH6-207ENST00000456246 SOCS5O75159 536 aa18■□□□□ 0.47
MSH6-207ENST00000456246 PROSCO94903 275 aa18■□□□□ 0.47
MSH6-207ENST00000456246 C6P13671 934 aa18■□□□□ 0.47
MSH6-207ENST00000456246 JUNDP17535 347 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms