RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 DKK3Q9UBP4 350 aa7.14□□□□□ -1.27
COMMD1-205ENST00000455659 GGT7Q9UJ14 662 aa7.14□□□□□ -1.27
COMMD1-205ENST00000455659 AMFRQ9UKV5 643 aa7.14□□□□□ -1.27
COMMD1-205ENST00000455659 GUCA1BQ9UMX6 200 aa7.14□□□□□ -1.27
COMMD1-205ENST00000455659 ATP8A1Q9Y2Q0 1164 aa7.14□□□□□ -1.27
COMMD1-205ENST00000455659 FADS3Q9Y5Q0 445 aa7.14□□□□□ -1.27
COMMD1-205ENST00000455659 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.13□□□□□ -1.27
COMMD1-205ENST00000455659 A0A1B0GVT2 93 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 TTC24A2A3L6 582 aaPredicted RBP7.13□□□□□ -1.27
COMMD1-205ENST00000455659 MIF4GDA9UHW6 222 aaKnown RBP7.13□□□□□ -1.27
COMMD1-205ENST00000455659 APOC4-APOC2K7ER74 178 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 MATN3O15232 486 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 GDF9O60383 454 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 CER1O95813 267 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 APOC2P02655 101 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 PRKCGP05129 697 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 SYPP08247 313 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 CCNB1P14635 433 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 CR2P20023 1033 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 HNRNPA2B1P22626 353 aaKnown RBP7.13□□□□□ -1.27
COMMD1-205ENST00000455659 CA4P22748 312 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 AKT2P31751 481 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 PTPN7P35236 360 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 MMP12P39900 470 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 CETN2P41208 172 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 CSNK1DP48730 415 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 C21orf59P57076 290 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 COPS2P61201 443 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 RPS21P63220 83 aaKnown RBP7.13□□□□□ -1.27
COMMD1-205ENST00000455659 IRX4P78413 519 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 IFI35P80217 286 aaPredicted RBP7.13□□□□□ -1.27
COMMD1-205ENST00000455659 ARHGAP8P85298 464 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 DSC2Q02487 901 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 ITKQ08881 620 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 ELP6Q0PNE2 266 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 SLC10A2Q12908 348 aaPredicted RBP7.13□□□□□ -1.27
COMMD1-205ENST00000455659 TRAF2Q12933 501 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 ZNF211Q13398 564 aaPredicted RBP7.13□□□□□ -1.27
COMMD1-205ENST00000455659 HNRNPDQ14103 355 aaKnown RBP7.13□□□□□ -1.27
COMMD1-205ENST00000455659 PRKD1Q15139 912 aaPredicted RBP7.13□□□□□ -1.27
COMMD1-205ENST00000455659 ZNF284Q2VY69 593 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 TMEM259Q4ZIN3 620 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 SLC45A4Q5BKX6 768 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 RALGPS1Q5JS13 557 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 SEL1L2Q5TEA6 688 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 ALG1LQ6GMV1 187 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 ERAP2Q6P179 960 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 NEK5Q6P3R8 708 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 BBS12Q6ZW61 710 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 BZW1Q7L1Q6 419 aaKnown RBP7.13□□□□□ -1.27
COMMD1-205ENST00000455659 PTAR1Q7Z6K3 402 aaPredicted RBP7.13□□□□□ -1.27
COMMD1-205ENST00000455659 ZSCAN30Q86W11 494 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 ZSWIM9Q86XI8 627 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 CAMK1DQ8IU85 385 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 RCOR2Q8IZ40 523 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 MINDY1Q8N5J2 469 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.13□□□□□ -1.27
COMMD1-205ENST00000455659 RNF10Q8N5U6 811 aaKnown RBP7.13□□□□□ -1.27
COMMD1-205ENST00000455659 TEX26Q8N6G2 289 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 CXorf40AQ8TE69 158 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 TFB1MQ8WVM0 346 aaKnown RBP7.13□□□□□ -1.27
COMMD1-205ENST00000455659 P3H4Q92791 437 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 KLK6Q92876 244 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 FATE1Q969F0 183 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 VOPP1Q96AW1 172 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 ECHDC3Q96DC8 303 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 ZNF641Q96N77 438 aaPredicted RBP7.13□□□□□ -1.27
COMMD1-205ENST00000455659 TSGA13Q96PP4 275 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 SEMA3CQ99985 751 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 ORAI3Q9BRQ5 295 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 WRAP53Q9BUR4 548 aaKnown RBP7.13□□□□□ -1.27
COMMD1-205ENST00000455659 HEMGNQ9BXL5 484 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 OSBPL8Q9BZF1 889 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 ZDHHC5Q9C0B5 715 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 SUV39H2Q9H5I1 410 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 NOD2Q9HC29 1040 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 FZD3Q9NPG1 666 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 PCDH12Q9NPG4 1184 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 TMEM9BQ9NQ34 198 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 RBM22Q9NW64 420 aaKnown RBP eCLIP7.13□□□□□ -1.27
COMMD1-205ENST00000455659 AMACRQ9UHK6 382 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 SLC6A14Q9UN76 642 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 DMTF1Q9Y222 760 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 PPP2R2CQ9Y2T4 447 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 PCDHA3Q9Y5H8 950 aa7.13□□□□□ -1.27
COMMD1-205ENST00000455659 ZNF106Q9H2Y7 1883 aaKnown RBP7.13□□□□□ -1.27
COMMD1-205ENST00000455659 C10orf142B7Z368 130 aa7.12□□□□□ -1.27
COMMD1-205ENST00000455659 PRAMEF26H0Y7S4 382 aa7.12□□□□□ -1.27
COMMD1-205ENST00000455659 ARHGAP33O14559 1287 aa7.12□□□□□ -1.27
COMMD1-205ENST00000455659 AREL1O15033 823 aa7.12□□□□□ -1.27
COMMD1-205ENST00000455659 SLC31A1O15431 190 aa7.12□□□□□ -1.27
COMMD1-205ENST00000455659 TSPAN6O43657 245 aa7.12□□□□□ -1.27
COMMD1-205ENST00000455659 TJP3O95049 919 aa7.12□□□□□ -1.27
COMMD1-205ENST00000455659 ELFN1P0C7U0 828 aa7.12□□□□□ -1.27
COMMD1-205ENST00000455659 C6P13671 934 aa7.12□□□□□ -1.27
COMMD1-205ENST00000455659 CCNCP24863 283 aa7.12□□□□□ -1.27
COMMD1-205ENST00000455659 NR2C2P49116 596 aa7.12□□□□□ -1.27
COMMD1-205ENST00000455659 CCT8P50990 548 aa7.12□□□□□ -1.27
COMMD1-205ENST00000455659 SUOXP51687 545 aa7.12□□□□□ -1.27
COMMD1-205ENST00000455659 LIMK1P53667 647 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms