RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 TM6SF2Q9BZW4 377 aa13.76□□□□□ -0.21
CLK3-203ENST00000454830 CD248Q9HCU0 757 aa13.76□□□□□ -0.21
CLK3-203ENST00000454830 ERFP50548 548 aa13.76□□□□□ -0.21
CLK3-203ENST00000454830 EML3Q32P44 896 aa13.76□□□□□ -0.21
CLK3-203ENST00000454830 HERC6Q8IVU3 1022 aa13.76□□□□□ -0.21
CLK3-203ENST00000454830 SMIM14Q96QK8 99 aa13.76□□□□□ -0.21
CLK3-203ENST00000454830 SH3BP1Q9Y3L3 701 aa13.76□□□□□ -0.21
CLK3-203ENST00000454830 GOLGA8QA0A0J9YX86 632 aa13.76□□□□□ -0.21
CLK3-203ENST00000454830 GOLGA8OA6NCC3 632 aa13.76□□□□□ -0.21
CLK3-203ENST00000454830 GOLGA8NF8WBI6 632 aa13.76□□□□□ -0.21
CLK3-203ENST00000454830 IHHQ14623 411 aa13.76□□□□□ -0.21
CLK3-203ENST00000454830 FSTL5Q8N475 847 aaPredicted RBP13.76□□□□□ -0.21
CLK3-203ENST00000454830 TMEM199Q8N511 208 aa13.76□□□□□ -0.21
CLK3-203ENST00000454830 MAN1C1Q9NR34 630 aa13.76□□□□□ -0.21
CLK3-203ENST00000454830 NUMBLQ9Y6R0 609 aa13.76□□□□□ -0.21
CLK3-203ENST00000454830 CXCL14O95715 111 aa13.75□□□□□ -0.21
CLK3-203ENST00000454830 GLP2RO95838 553 aa13.75□□□□□ -0.21
CLK3-203ENST00000454830 MMP2P08253 660 aa13.75□□□□□ -0.21
CLK3-203ENST00000454830 HADHAP40939 763 aa13.75□□□□□ -0.21
CLK3-203ENST00000454830 CCR10P46092 362 aa13.75□□□□□ -0.21
CLK3-203ENST00000454830 RGRP47804 291 aa13.75□□□□□ -0.21
CLK3-203ENST00000454830 ARCN1P48444 511 aaKnown RBP13.75□□□□□ -0.21
CLK3-203ENST00000454830 CORO1BQ9BR76 489 aa13.75□□□□□ -0.21
CLK3-203ENST00000454830 PRKAG2Q9UGJ0 569 aa13.75□□□□□ -0.21
CLK3-203ENST00000454830 LSM7Q9UK45 103 aaKnown RBP13.75□□□□□ -0.21
CLK3-203ENST00000454830 ABLIM3O94929 683 aa13.75□□□□□ -0.21
CLK3-203ENST00000454830 MTA1Q13330 715 aa13.75□□□□□ -0.21
CLK3-203ENST00000454830 UBAP2LQ14157 1087 aaKnown RBP13.75□□□□□ -0.21
CLK3-203ENST00000454830 ITIH5Q86UX2 942 aa13.75□□□□□ -0.21
CLK3-203ENST00000454830 TBC1D10AQ9BXI6 508 aa13.75□□□□□ -0.21
CLK3-203ENST00000454830 CCDC68Q9H2F9 335 aa13.75□□□□□ -0.21
CLK3-203ENST00000454830 ZNF334Q9HCZ1 680 aaPredicted RBP13.75□□□□□ -0.21
CLK3-203ENST00000454830 BPIFA1Q9NP55 256 aa13.75□□□□□ -0.21
CLK3-203ENST00000454830 FGF18O76093 207 aa13.75□□□□□ -0.21
CLK3-203ENST00000454830 SLC35E2BP0CK96 405 aa13.75□□□□□ -0.21
CLK3-203ENST00000454830 CCDC166P0CW27 439 aa13.75□□□□□ -0.21
CLK3-203ENST00000454830 HOXD9P28356 352 aaPredicted RBP13.75□□□□□ -0.21
CLK3-203ENST00000454830 ABL2P42684 1182 aa13.75□□□□□ -0.21
CLK3-203ENST00000454830 RHOAP61586 193 aa13.75□□□□□ -0.21
CLK3-203ENST00000454830 ACBD5Q5T8D3 534 aaPredicted RBP13.75□□□□□ -0.21
CLK3-203ENST00000454830 GLT6D1Q7Z4J2 308 aa13.75□□□□□ -0.21
CLK3-203ENST00000454830 GCNAQ96QF7 691 aa13.75□□□□□ -0.21
CLK3-203ENST00000454830 GATA5Q9BWX5 397 aaPredicted RBP13.75□□□□□ -0.21
CLK3-203ENST00000454830 GTSE1Q9NYZ3 720 aa13.75□□□□□ -0.21
CLK3-203ENST00000454830 MARCH4Q9P2E8 410 aaPredicted RBP13.75□□□□□ -0.21
CLK3-203ENST00000454830 TSR3Q9UJK0 312 aaKnown RBP13.75□□□□□ -0.21
CLK3-203ENST00000454830 NYNRINQ9P2P1 1898 aaKnown RBP13.74□□□□□ -0.21
CLK3-203ENST00000454830 TRIM43BA6NCK2 446 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 CCDC22O60826 627 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 FGF1P05230 155 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 HLA-DPA1P20036 260 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 MZF1P28698 734 aaPredicted RBP13.74□□□□□ -0.21
CLK3-203ENST00000454830 GRIA4P48058 902 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 MNX1P50219 401 aaPredicted RBP13.74□□□□□ -0.21
CLK3-203ENST00000454830 RAB33AQ14088 237 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 ARTNQ5T4W7 220 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 LRRC8EQ6NSJ5 796 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 KLC3Q6P597 504 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 MFN1Q8IWA4 741 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 FIBCD1Q8N539 461 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 ZNF781Q8N8C0 355 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 RAB3IL1Q8TBN0 382 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 TRIM43Q96BQ3 446 aaPredicted RBP13.74□□□□□ -0.21
CLK3-203ENST00000454830 SMG9Q9H0W8 520 aaKnown RBP13.74□□□□□ -0.21
CLK3-203ENST00000454830 TREX1Q9NSU2 369 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 FCF1Q9Y324 198 aaKnown RBP13.74□□□□□ -0.21
CLK3-203ENST00000454830 A0A0U1RQS6 177 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 A0A1W2PRU2 124 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 NEMP2A6NFY4 417 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.74□□□□□ -0.21
CLK3-203ENST00000454830 B2RBV5 119 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 CHRNGP07510 517 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 CNPP09543 421 aaKnown RBP13.74□□□□□ -0.21
CLK3-203ENST00000454830 SP100P23497 879 aaPredicted RBP13.74□□□□□ -0.21
CLK3-203ENST00000454830 SDCCAG8Q86SQ7 713 aaPredicted RBP13.74□□□□□ -0.21
CLK3-203ENST00000454830 HS6ST3Q8IZP7 471 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 ELMOD1Q8N336 334 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 TDRD5Q8NAT2 981 aaKnown RBP13.74□□□□□ -0.21
CLK3-203ENST00000454830 SCG3Q8WXD2 468 aaKnown RBP13.74□□□□□ -0.21
CLK3-203ENST00000454830 PHF21BQ96EK2 531 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 ANKRD6Q9Y2G4 727 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 E9PBE3 544 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 H0Y3Z8 333 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 KLHL41O60662 606 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 SNNO75324 88 aaPredicted RBP13.74□□□□□ -0.21
CLK3-203ENST00000454830 ATP6V1G2O95670 118 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 NDST3O95803 873 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 GOT2P00505 430 aaKnown RBP13.74□□□□□ -0.21
CLK3-203ENST00000454830 CRABP2P29373 138 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 SLC8A1P32418 973 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 FAM83EQ2M2I3 478 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 STXBP5Q5T5C0 1151 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 MRNIPQ6NTE8 343 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 NAPRTQ6XQN6 538 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 POU5F2Q8N7G0 328 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 C2CD4AQ8NCU7 369 aaPredicted RBP13.74□□□□□ -0.21
CLK3-203ENST00000454830 TACO1Q9BSH4 297 aaKnown RBP13.74□□□□□ -0.21
CLK3-203ENST00000454830 CFAP97Q9P2B7 532 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 ZNF212Q9UDV6 495 aa13.74□□□□□ -0.21
CLK3-203ENST00000454830 LOC100653049A0A140TA62 436 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms