RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 NSUN2Q08J23 767 aaKnown RBP eCLIP15.84■□□□□ 0.13
VCX3B-204ENST00000453306 STARD3Q14849 445 aa15.84■□□□□ 0.13
VCX3B-204ENST00000453306 ALG1LQ6GMV1 187 aa15.84■□□□□ 0.13
VCX3B-204ENST00000453306 TIGD7Q6NT04 549 aaPredicted RBP15.84■□□□□ 0.13
VCX3B-204ENST00000453306 DRICH1Q6PGQ1 229 aaPredicted RBP15.84■□□□□ 0.13
VCX3B-204ENST00000453306 NCEH1Q6PIU2 408 aa15.84■□□□□ 0.13
VCX3B-204ENST00000453306 PIP4P1Q86T03 277 aa15.84■□□□□ 0.13
VCX3B-204ENST00000453306 SRLQ86TD4 932 aa15.84■□□□□ 0.13
VCX3B-204ENST00000453306 PRPF39Q86UA1 669 aaKnown RBP15.84■□□□□ 0.13
VCX3B-204ENST00000453306 MMAAQ8IVH4 418 aaKnown RBP15.84■□□□□ 0.13
VCX3B-204ENST00000453306 RGL4Q8IZJ4 473 aa15.84■□□□□ 0.13
VCX3B-204ENST00000453306 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.84■□□□□ 0.13
VCX3B-204ENST00000453306 DEFB119Q8N690 84 aa15.84■□□□□ 0.13
VCX3B-204ENST00000453306 OR2T3Q8NH03 318 aa15.84■□□□□ 0.13
VCX3B-204ENST00000453306 CCDC110Q8TBZ0 833 aa15.84■□□□□ 0.13
VCX3B-204ENST00000453306 TADA1Q96BN2 335 aa15.84■□□□□ 0.13
VCX3B-204ENST00000453306 AGAP3Q96P47 875 aa15.84■□□□□ 0.13
VCX3B-204ENST00000453306 CINPQ9BW66 212 aaPredicted RBP15.84■□□□□ 0.13
VCX3B-204ENST00000453306 RSPH9Q9H1X1 276 aaPredicted RBP15.84■□□□□ 0.13
VCX3B-204ENST00000453306 CAPN10Q9HC96 672 aa15.84■□□□□ 0.13
VCX3B-204ENST00000453306 CYP8B1Q9UNU6 501 aa15.84■□□□□ 0.13
VCX3B-204ENST00000453306 DRG1Q9Y295 367 aaKnown RBP15.84■□□□□ 0.13
VCX3B-204ENST00000453306 NEU2Q9Y3R4 380 aa15.84■□□□□ 0.13
VCX3B-204ENST00000453306 NEUROG3Q9Y4Z2 214 aa15.84■□□□□ 0.13
VCX3B-204ENST00000453306 F5H423 210 aaPredicted RBP15.83■□□□□ 0.12
VCX3B-204ENST00000453306 KRIT1O00522 736 aa15.83■□□□□ 0.12
VCX3B-204ENST00000453306 ARHGAP33O14559 1287 aa15.83■□□□□ 0.12
VCX3B-204ENST00000453306 URI1O94763 535 aaPredicted RBP15.83■□□□□ 0.12
VCX3B-204ENST00000453306 SPINK2P20155 84 aa15.83■□□□□ 0.12
VCX3B-204ENST00000453306 CHRNA3P32297 505 aa15.83■□□□□ 0.12
VCX3B-204ENST00000453306 CSNK1DP48730 415 aa15.83■□□□□ 0.12
VCX3B-204ENST00000453306 SIM1P81133 766 aaPredicted RBP15.83■□□□□ 0.12
VCX3B-204ENST00000453306 SLC14A1Q13336 389 aa15.83■□□□□ 0.12
VCX3B-204ENST00000453306 POM121L1PQ3SYA9 428 aa15.83■□□□□ 0.12
VCX3B-204ENST00000453306 ARSIQ5FYB1 569 aa15.83■□□□□ 0.12
VCX3B-204ENST00000453306 WDR45BQ5MNZ6 344 aa15.83■□□□□ 0.12
VCX3B-204ENST00000453306 ZSWIM9Q86XI8 627 aa15.83■□□□□ 0.12
VCX3B-204ENST00000453306 CACUL1Q86Y37 369 aa15.83■□□□□ 0.12
VCX3B-204ENST00000453306 TMPRSS6Q8IU80 811 aa15.83■□□□□ 0.12
VCX3B-204ENST00000453306 CDKL3Q8IVW4 592 aaPredicted RBP15.83■□□□□ 0.12
VCX3B-204ENST00000453306 MINDY1Q8N5J2 469 aa15.83■□□□□ 0.12
VCX3B-204ENST00000453306 ARRDC3Q96B67 414 aa15.83■□□□□ 0.12
VCX3B-204ENST00000453306 RTP4Q96DX8 246 aa15.83■□□□□ 0.12
VCX3B-204ENST00000453306 HSPA12BQ96MM6 686 aa15.83■□□□□ 0.12
VCX3B-204ENST00000453306 SEMA3CQ99985 751 aa15.83■□□□□ 0.12
VCX3B-204ENST00000453306 FRMD8P1Q9BZ68 369 aaPredicted RBP15.83■□□□□ 0.12
VCX3B-204ENST00000453306 GLOD4Q9HC38 313 aa15.83■□□□□ 0.12
VCX3B-204ENST00000453306 C5orf60A6NFR6 353 aa15.82■□□□□ 0.12
VCX3B-204ENST00000453306 SYNCRIPO60506 623 aaKnown RBP15.82■□□□□ 0.12
VCX3B-204ENST00000453306 LEFTY1O75610 366 aa15.82■□□□□ 0.12
VCX3B-204ENST00000453306 PIGNO95427 931 aa15.82■□□□□ 0.12
VCX3B-204ENST00000453306 METTL18O95568 372 aa15.82■□□□□ 0.12
VCX3B-204ENST00000453306 POP4O95707 220 aaKnown RBP15.82■□□□□ 0.12
VCX3B-204ENST00000453306 ITGAVP06756 1048 aa15.82■□□□□ 0.12
VCX3B-204ENST00000453306 COILP38432 576 aaPredicted RBP15.82■□□□□ 0.12
VCX3B-204ENST00000453306 SCNN1BP51168 640 aa15.82■□□□□ 0.12
VCX3B-204ENST00000453306 SNRPD1P62314 119 aaKnown RBP15.82■□□□□ 0.12
VCX3B-204ENST00000453306 SKOR1P84550 965 aa15.82■□□□□ 0.12
VCX3B-204ENST00000453306 ELAVL3Q14576 367 aaKnown RBP15.82■□□□□ 0.12
VCX3B-204ENST00000453306 ZNF235Q14590 738 aa15.82■□□□□ 0.12
VCX3B-204ENST00000453306 ANKRD20A2Q5SQ80 823 aa15.82■□□□□ 0.12
VCX3B-204ENST00000453306 ANKRD20A1Q5TYW2 823 aa15.82■□□□□ 0.12
VCX3B-204ENST00000453306 ANKRD20A3Q5VUR7 823 aa15.82■□□□□ 0.12
VCX3B-204ENST00000453306 KIAA1324Q6UXG2 1013 aaKnown RBP15.82■□□□□ 0.12
VCX3B-204ENST00000453306 CAMK1DQ8IU85 385 aa15.82■□□□□ 0.12
VCX3B-204ENST00000453306 AADATQ8N5Z0 425 aa15.82■□□□□ 0.12
VCX3B-204ENST00000453306 SPATA22Q8NHS9 363 aa15.82■□□□□ 0.12
VCX3B-204ENST00000453306 MAIP1Q8WWC4 291 aa15.82■□□□□ 0.12
VCX3B-204ENST00000453306 MAGOHBQ96A72 148 aaKnown RBP15.82■□□□□ 0.12
VCX3B-204ENST00000453306 OXNAD1Q96HP4 312 aaPredicted RBP15.82■□□□□ 0.12
VCX3B-204ENST00000453306 SMIM14Q96QK8 99 aa15.82■□□□□ 0.12
VCX3B-204ENST00000453306 NUDCD1Q96RS6 583 aa15.82■□□□□ 0.12
VCX3B-204ENST00000453306 HEPHQ9BQS7 1158 aa15.82■□□□□ 0.12
VCX3B-204ENST00000453306 ZDHHC5Q9C0B5 715 aa15.82■□□□□ 0.12
VCX3B-204ENST00000453306 DDX47Q9H0S4 455 aaKnown RBP15.82■□□□□ 0.12
VCX3B-204ENST00000453306 DNAAF2Q9NVR5 837 aaKnown RBP15.82■□□□□ 0.12
VCX3B-204ENST00000453306 SERGEFQ9UGK8 458 aa15.82■□□□□ 0.12
VCX3B-204ENST00000453306 CDC23Q9UJX2 597 aa15.82■□□□□ 0.12
VCX3B-204ENST00000453306 RALYQ9UKM9 306 aaKnown RBP15.82■□□□□ 0.12
VCX3B-204ENST00000453306 TNRC6BQ9UPQ9 1833 aaKnown RBP15.82■□□□□ 0.12
VCX3B-204ENST00000453306 MYO18AQ92614 2054 aaKnown RBP15.82■□□□□ 0.12
VCX3B-204ENST00000453306 SPAARA0A1B0GVQ0 90 aa15.81■□□□□ 0.12
VCX3B-204ENST00000453306 TRAFD1O14545 582 aaPredicted RBP15.81■□□□□ 0.12
VCX3B-204ENST00000453306 GCATO75600 419 aa15.81■□□□□ 0.12
VCX3B-204ENST00000453306 PRLP01236 227 aa15.81■□□□□ 0.12
VCX3B-204ENST00000453306 TUBB4AP04350 444 aa15.81■□□□□ 0.12
VCX3B-204ENST00000453306 ITIH2P19823 946 aa15.81■□□□□ 0.12
VCX3B-204ENST00000453306 NFKB1P19838 968 aa15.81■□□□□ 0.12
VCX3B-204ENST00000453306 CD6P30203 668 aa15.81■□□□□ 0.12
VCX3B-204ENST00000453306 DRD3P35462 400 aa15.81■□□□□ 0.12
VCX3B-204ENST00000453306 PTGIRP43119 386 aa15.81■□□□□ 0.12
VCX3B-204ENST00000453306 TRAF2Q12933 501 aa15.81■□□□□ 0.12
VCX3B-204ENST00000453306 PTPRRQ15256 657 aa15.81■□□□□ 0.12
VCX3B-204ENST00000453306 ZNF423Q2M1K9 1284 aa15.81■□□□□ 0.12
VCX3B-204ENST00000453306 PID1Q7Z2X4 250 aa15.81■□□□□ 0.12
VCX3B-204ENST00000453306 METTL3Q86U44 580 aaKnown RBP15.81■□□□□ 0.12
VCX3B-204ENST00000453306 SLC41A1Q8IVJ1 513 aa15.81■□□□□ 0.12
VCX3B-204ENST00000453306 RYBPQ8N488 228 aaPredicted RBP15.81■□□□□ 0.12
VCX3B-204ENST00000453306 PIP4K2CQ8TBX8 421 aa15.81■□□□□ 0.12
VCX3B-204ENST00000453306 GRIN3AQ8TCU5 1115 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms