RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 RBM15Q96T37 977 aaKnown RBP eCLIP14.45□□□□□ -0.19e-7■■■■□ 22.9
LYSMD3-202ENST00000453259 CPEB1Q9BZB8 566 aaKnown RBP14.45□□□□□ -0.1
LYSMD3-202ENST00000453259 AKAP7Q9P0M2 348 aaPredicted RBP14.45□□□□□ -0.1
LYSMD3-202ENST00000453259 GULP1Q9UBP9 304 aa14.45□□□□□ -0.1
LYSMD3-202ENST00000453259 SEPT3Q9UH03 358 aa14.45□□□□□ -0.1
LYSMD3-202ENST00000453259 GGT7Q9UJ14 662 aa14.45□□□□□ -0.1
LYSMD3-202ENST00000453259 TMEM59LQ9UK28 342 aa14.45□□□□□ -0.1
LYSMD3-202ENST00000453259 DNAJC12Q9UKB3 198 aa14.45□□□□□ -0.1
LYSMD3-202ENST00000453259 PNMA8BQ9ULN7 279 aaPredicted RBP14.45□□□□□ -0.1
LYSMD3-202ENST00000453259 LOXL2Q9Y4K0 774 aa14.45□□□□□ -0.1
LYSMD3-202ENST00000453259 PCDHGA4Q9Y5G9 962 aa14.45□□□□□ -0.1
LYSMD3-202ENST00000453259 TLN1Q9Y490 2541 aaKnown RBP14.45□□□□□ -0.1
LYSMD3-202ENST00000453259 KIF26BQ2KJY2 2108 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 A0A1W2PQM1 296 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 CFAP69A5D8W1 941 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 CYSRT1A8MQ03 144 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 FOXN3O00409 490 aaPredicted RBP14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 ZW10O43264 779 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 KDELR3O43731 214 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 MMP20O60882 483 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 ADRA1BP35368 520 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 ACVRL1P37023 503 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 STX17P56962 302 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 CCL7P80098 99 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 SRSF1Q07955 248 aaKnown RBP eCLIP14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 MTM1Q13496 603 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 IRF4Q15306 451 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 ALG11Q2TAA5 492 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 KLHL40Q2TBA0 621 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 CERCAMQ5T4B2 595 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 DTX1Q86Y01 620 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 HID1Q8IV36 788 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 GPR156Q8NFN8 814 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 OR6K2Q8NGY2 324 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 EXTL1Q92935 676 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 GEMIN8Q9NWZ8 242 aaKnown RBP14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 KLQ9UEF7 1012 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 PISDQ9UG56 409 aa14.44□□□□□ -0.1
LYSMD3-202ENST00000453259 TSPAN11A1L157 253 aa14.43□□□□□ -0.1
LYSMD3-202ENST00000453259 NUDT21O43809 227 aaKnown RBP14.43□□□□□ -0.1
LYSMD3-202ENST00000453259 CYP11B1P15538 503 aa14.43□□□□□ -0.1
LYSMD3-202ENST00000453259 XPAP23025 273 aaPredicted RBP14.43□□□□□ -0.1
LYSMD3-202ENST00000453259 KELP23276 732 aa14.43□□□□□ -0.1
LYSMD3-202ENST00000453259 SRP54P61011 504 aaKnown RBP14.43□□□□□ -0.1
LYSMD3-202ENST00000453259 OGFOD3Q6PK18 319 aa14.43□□□□□ -0.1
LYSMD3-202ENST00000453259 STRADAQ7RTN6 431 aa14.43□□□□□ -0.1
LYSMD3-202ENST00000453259 TBC1D31Q96DN5 1066 aa14.43□□□□□ -0.1
LYSMD3-202ENST00000453259 CFAP57Q96MR6 1250 aa14.43□□□□□ -0.1
LYSMD3-202ENST00000453259 WDR92Q96MX6 357 aa14.43□□□□□ -0.1
LYSMD3-202ENST00000453259 FOXP3Q9BZS1 431 aa14.43□□□□□ -0.1
LYSMD3-202ENST00000453259 SLC25A18Q9H1K4 315 aa14.43□□□□□ -0.1
LYSMD3-202ENST00000453259 SIX2Q9NPC8 291 aa14.43□□□□□ -0.1
LYSMD3-202ENST00000453259 MBNL1Q9NR56 388 aaKnown RBP14.43□□□□□ -0.1
LYSMD3-202ENST00000453259 TMPRSS4Q9NRS4 437 aa14.43□□□□□ -0.1
LYSMD3-202ENST00000453259 SIRPGQ9P1W8 387 aa14.43□□□□□ -0.1
LYSMD3-202ENST00000453259 RABGEF1Q9UJ41 708 aa14.43□□□□□ -0.1
LYSMD3-202ENST00000453259 TUBD1Q9UJT1 453 aa14.43□□□□□ -0.1
LYSMD3-202ENST00000453259 SCN8AQ9UQD0 1980 aa14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 PYCARD-AS1I3L0S3 204 aa14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 TNFRSF10CO14798 259 aa14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 HGSO14964 777 aaPredicted RBP14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 TMCC1O94876 653 aa14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 TNFP01375 233 aa14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 HOXC4P09017 264 aaPredicted RBP14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 GKP32189 559 aa14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 PTPN9P43378 593 aa14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 YBEYP58557 167 aaPredicted RBP14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 KIAA1024LP59773 190 aa14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 TGIF1Q15583 401 aa14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 TSR1Q2NL82 804 aaKnown RBP14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 WSCD2Q2TBF2 565 aa14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 RWDD4Q6NW29 188 aaKnown RBP14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 ERAP2Q6P179 960 aa14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 BRAT1Q6PJG6 821 aa14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 SPRED1Q7Z699 444 aa14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 ZNF677Q86XU0 584 aa14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 NTAN1Q96AB6 310 aa14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 ZNF641Q96N77 438 aaPredicted RBP14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 APOOQ9BUR5 198 aa14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 PLCB1Q9NQ66 1216 aa14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 DONSONQ9NYP3 566 aa14.42□□□□□ -0.1
LYSMD3-202ENST00000453259 PRAMEF33A0A0G2JMD5 474 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 STMND1H3BQB6 276 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 BIN1O00499 593 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 BUB1O43683 1085 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 PRAMEF10O60809 474 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 LRIG2O94898 1065 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 CELA2BP08218 269 aaPredicted RBP14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 FAM87AP0C7U9 286 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 TIMP2P16035 220 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 SDC4P31431 198 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 RHOAP61586 193 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 TBR1Q16650 682 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 MAN2A1Q16706 1144 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 UGP2Q16851 508 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 PARP15Q460N3 678 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 C14orf28Q4W4Y0 310 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 ENPP7Q6UWV6 458 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 DNAAF5Q86Y56 855 aa14.41□□□□□ -0.1
LYSMD3-202ENST00000453259 SLITRK4Q8IW52 837 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms