RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 SLC39A12Q504Y0 691 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 MON1AQ86VX9 555 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 SCN4BQ8IWT1 228 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 PQLC1Q8N2U9 271 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 OR13J1Q8NGT2 312 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 CEP70Q8NHQ1 597 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 CCDC126Q96EE4 140 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 TSC22D3Q99576 134 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 NDNQ99608 321 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 WDR41Q9HAD4 459 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 EFCAB1Q9HAE3 211 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 SPC25Q9HBM1 224 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 SMIM24O75264 130 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 MMP2P08253 660 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 SLC2A3P11169 496 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 XRCC1P18887 633 aaPredicted RBP17.06■□□□□ 0.32
TOM1-210ENST00000449058 DPP6P42658 865 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 IHHQ14623 411 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 AGAP9Q5VTM2 703 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 CHSY3Q70JA7 882 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 HMCESQ96FZ2 354 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 UBXN10Q96LJ8 280 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 FAM192AQ9GZU8 254 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 ZCWPW1Q9H0M4 648 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 NT5MQ9NPB1 228 aa17.06■□□□□ 0.32
TOM1-210ENST00000449058 FRMPD3Q5JV73 1810 aa17.05■□□□□ 0.32
TOM1-210ENST00000449058 A8MT66 165 aa17.05■□□□□ 0.32
TOM1-210ENST00000449058 J3KR12 359 aa17.05■□□□□ 0.32
TOM1-210ENST00000449058 B4GALT3O60512 393 aa17.05■□□□□ 0.32
TOM1-210ENST00000449058 LTA4HP09960 611 aaKnown RBP17.05■□□□□ 0.32
TOM1-210ENST00000449058 HNRNPLP14866 589 aaKnown RBP eCLIP17.05■□□□□ 0.322e-10■■■■■ 79.3
TOM1-210ENST00000449058 VCLP18206 1134 aa17.05■□□□□ 0.32
TOM1-210ENST00000449058 KCNA5P22460 613 aa17.05■□□□□ 0.32
TOM1-210ENST00000449058 TNK2Q07912 1038 aa17.05■□□□□ 0.32
TOM1-210ENST00000449058 SLC10A7Q0GE19 358 aa17.05■□□□□ 0.32
TOM1-210ENST00000449058 MED21Q13503 144 aa17.05■□□□□ 0.32
TOM1-210ENST00000449058 IFNL1Q8IU54 200 aa17.05■□□□□ 0.32
TOM1-210ENST00000449058 GABPB2Q8TAK5 448 aaPredicted RBP17.05■□□□□ 0.32
TOM1-210ENST00000449058 TSPAN17Q96FV3 270 aa17.05■□□□□ 0.32
TOM1-210ENST00000449058 FAR2Q96K12 515 aa17.05■□□□□ 0.32
TOM1-210ENST00000449058 BTBD9Q96Q07 612 aa17.05■□□□□ 0.32
TOM1-210ENST00000449058 SUDS3Q9H7L9 328 aaPredicted RBP17.05■□□□□ 0.32
TOM1-210ENST00000449058 TMEM248Q9NWD8 314 aa17.05■□□□□ 0.32
TOM1-210ENST00000449058 MROH6A6NGR9 719 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 ADAMTS4O75173 837 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 IPO13O94829 963 aaKnown RBP17.04■□□□□ 0.32
TOM1-210ENST00000449058 WISP3O95389 354 aaPredicted RBP17.04■□□□□ 0.32
TOM1-210ENST00000449058 HAPLN1P10915 354 aaPredicted RBP17.04■□□□□ 0.32
TOM1-210ENST00000449058 CD86P42081 329 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 ALDH1A3P47895 512 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 ZNF157P51786 506 aaPredicted RBP17.04■□□□□ 0.32
TOM1-210ENST00000449058 FLOT2Q14254 428 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 MARC1Q5VT66 337 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 HOMEZQ8IX15 550 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 TEX26Q8N6G2 289 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 TRIB2Q92519 343 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 TADA1Q96BN2 335 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 ZYG11BQ9C0D3 744 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 ABI2Q9NYB9 513 aaPredicted RBP17.04■□□□□ 0.32
TOM1-210ENST00000449058 GTSE1Q9NYZ3 720 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 SLC7A4O43246 635 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 AHCYL1O43865 530 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 OAZ2O95190 189 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 ENO3P13929 434 aaPredicted RBP17.04■□□□□ 0.32
TOM1-210ENST00000449058 PKNOX1P55347 436 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 TBX4P57082 545 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 IRX1P78414 480 aaPredicted RBP17.04■□□□□ 0.32
TOM1-210ENST00000449058 ART3Q13508 389 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 PSMD5Q16401 504 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 MS4A13Q5J8X5 152 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 ZFP1Q6P2D0 407 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 TFAP2DQ7Z6R9 452 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 SDCCAG8Q86SQ7 713 aaPredicted RBP17.04■□□□□ 0.32
TOM1-210ENST00000449058 CILP2Q8IUL8 1156 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 TMEM126BQ8IUX1 230 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 NUP93Q8N1F7 819 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 SPPL2BQ8TCT7 592 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 MEAF6Q9HAF1 191 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 BCAP29Q9UHQ4 241 aa17.04■□□□□ 0.32
TOM1-210ENST00000449058 IGLV3-10A0A075B6K4 115 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 CCDC189A1A4V9 331 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 ASGR1P07306 291 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 RBP1P09455 135 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 CCDC166P0CW27 439 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 ME2P23368 584 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 MAXP61244 160 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 MS4A2Q01362 244 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 DSC2Q02487 901 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 GRM2Q14416 872 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 ACAP2Q15057 778 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 ALFQ53S48 1182 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 FAM26DQ5JW98 314 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 HECTD2Q5U5R9 776 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 SDHAF4Q5VUM1 108 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 KLC3Q6P597 504 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 SPNS2Q8IVW8 549 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 C8orf48Q96LL4 319 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 KLHL5Q96PQ7 755 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 PIDD1Q9HB75 910 aa17.03■□□□□ 0.32
TOM1-210ENST00000449058 TNFRSF12AQ9NP84 129 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms