RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 TANGO2Q6ICL3 276 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 ATG14Q6ZNE5 492 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 CENPUQ71F23 418 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 TERB1Q8NA31 727 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 EXOC2Q96KP1 924 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 IER2Q9BTL4 223 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 GOLPH3LQ9H4A5 285 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 WDR26Q9H7D7 661 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 EVLQ9UI08 416 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 ACAD8Q9UKU7 415 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 CDC14AQ9UNH5 594 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 PCDHGC5Q9Y5F6 944 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 KCNU1A8MYU2 1149 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 GZMAP12544 262 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 CTNNA1P35221 906 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 PTPN9P43378 593 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 GJB7Q6PEY0 223 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 RRM2BQ7LG56 351 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 TMEM151BQ8IW70 566 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 CHCHD4Q8N4Q1 142 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 SLC43A3Q8NBI5 491 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 HEXDCQ8WVB3 486 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 FAXDC2Q96IV6 333 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 TMEM121Q9BTD3 319 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 KDM4CQ9H3R0 1056 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 LTB4R2Q9NPC1 389 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 OBP2AQ9NY56 170 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 COPS7AQ9UBW8 275 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 PCDHGA2Q9Y5H1 932 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 MEIS3P2A8K0S8 358 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 CDK14O94921 469 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 FTCDO95954 541 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 CATP04040 527 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 APRTP07741 180 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 RHOQP17081 205 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 CTHP32929 405 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 CSNK1EP49674 416 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 AP1S1P61966 158 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 MAP7Q14244 749 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 CERCAMQ5T4B2 595 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 SLC8B1Q6J4K2 584 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 RSPO2Q6UXX9 243 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 IFT20Q8IY31 132 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 CPT1CQ8TCG5 803 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 FAM111AQ96PZ2 611 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 TRMT6Q9UJA5 497 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 NENFQ9UMX5 172 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 PCDHA13Q9Y5I0 950 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 SAR1BQ9Y6B6 198 aa5.68□□□□□ -1.5
CDC42BPA-209ENST00000448940 DICER1Q9UPY3 1922 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 CACNA1FO60840 1977 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 A0A1W2PP55 124 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 TBX18O95935 607 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 BMP1P13497 986 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 TYRP1P17643 537 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 RPA3P35244 121 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 CSKP41240 450 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 MAPKAPK2P49137 400 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 RGS1Q08116 209 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 TRIP13Q15645 432 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 PARP15Q460N3 678 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 C2CD6Q53TS8 623 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 C4orf22Q6V702 233 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 GPR155Q7Z3F1 870 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 SLC9B2Q86UD5 537 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 OR2T3Q8NH03 318 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 PYROXD1Q8WU10 500 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 SHC3Q92529 594 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 USP7Q93009 1102 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 DNAJC19Q96DA6 116 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 TSPAN17Q96FV3 270 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 PPP1R10Q96QC0 940 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 MFRPQ9BY79 579 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 TNKS2Q9H2K2 1166 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 C19orf25Q9UFG5 118 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 NAALADL1Q9UQQ1 740 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 STON1Q9Y6Q2 735 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 A1L4Q6 167 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 MMEP08473 750 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 CDK4P11802 303 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 PON1P27169 355 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 GPC1P35052 558 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 POLD2P49005 469 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 GALCP54803 685 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 FAM189BP81408 668 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 FLOT2Q14254 428 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 ELAVL3Q14576 367 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 SMAD2Q15796 467 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 CARD16Q5EG05 197 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 NLRP9Q7RTR0 991 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 PCDH20Q8N6Y1 951 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 PPP1R14AQ96A00 147 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 VCPIP1Q96JH7 1222 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 PBKQ96KB5 322 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 OSBPL1AQ9BXW6 950 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 NDEL1Q9GZM8 345 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 MPP6Q9NZW5 540 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 SRPK3Q9UPE1 567 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 GALK1P51570 392 aa5.67□□□□□ -1.5
CDC42BPA-209ENST00000448940 CCR4P51679 360 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms