RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 TRIP12Q14669 1992 aaPredicted RBP13.78□□□□□ -0.2
POLR1B-209ENST00000448770 ATP6AP2A0A1C7CYW4 349 aa13.78□□□□□ -0.2
POLR1B-209ENST00000448770 TCRBV3S1A0A5B6 114 aa13.78□□□□□ -0.2
POLR1B-209ENST00000448770 ATP6AP2O75787 350 aa13.78□□□□□ -0.2
POLR1B-209ENST00000448770 COL6A2P12110 1019 aa13.78□□□□□ -0.2
POLR1B-209ENST00000448770 ATP6V1B2P21281 511 aa13.78□□□□□ -0.2
POLR1B-209ENST00000448770 ADRA1AP35348 466 aa13.78□□□□□ -0.2
POLR1B-209ENST00000448770 IREB2P48200 963 aaKnown RBP13.78□□□□□ -0.2
POLR1B-209ENST00000448770 RHDQ02161 417 aa13.78□□□□□ -0.2
POLR1B-209ENST00000448770 FASTKQ14296 549 aaKnown RBP13.78□□□□□ -0.2
POLR1B-209ENST00000448770 MYBPC3Q14896 1274 aa13.78□□□□□ -0.2
POLR1B-209ENST00000448770 INTS6LQ5JSJ4 861 aaKnown RBP13.78□□□□□ -0.2
POLR1B-209ENST00000448770 C8orf82Q6P1X6 216 aaPredicted RBP13.78□□□□□ -0.2
POLR1B-209ENST00000448770 RETREG3Q86VR2 466 aa13.78□□□□□ -0.2
POLR1B-209ENST00000448770 C2CD4AQ8NCU7 369 aaPredicted RBP13.78□□□□□ -0.2
POLR1B-209ENST00000448770 OR6J1Q8NGC5 347 aa13.78□□□□□ -0.2
POLR1B-209ENST00000448770 C3orf30Q96M34 536 aa13.78□□□□□ -0.2
POLR1B-209ENST00000448770 WDCPQ9H6R7 721 aa13.78□□□□□ -0.2
POLR1B-209ENST00000448770 IRAK4Q9NWZ3 460 aa13.78□□□□□ -0.2
POLR1B-209ENST00000448770 UTP6Q9NYH9 597 aaKnown RBP13.78□□□□□ -0.2
POLR1B-209ENST00000448770 SNX13Q9Y5W8 968 aa13.78□□□□□ -0.2
POLR1B-209ENST00000448770 PTGDR2Q9Y5Y4 395 aa13.78□□□□□ -0.2
POLR1B-209ENST00000448770 DICER1Q9UPY3 1922 aaKnown RBP13.77□□□□□ -0.2
POLR1B-209ENST00000448770 ZNF839A8K0R7 811 aa13.77□□□□□ -0.21
POLR1B-209ENST00000448770 C9JVG2 144 aa13.77□□□□□ -0.21
POLR1B-209ENST00000448770 CCL22O00626 93 aa13.77□□□□□ -0.21
POLR1B-209ENST00000448770 SOCS2O14508 198 aa13.77□□□□□ -0.21
POLR1B-209ENST00000448770 PMPCBO75439 489 aa13.77□□□□□ -0.21
POLR1B-209ENST00000448770 TIPRLO75663 272 aa13.77□□□□□ -0.21
POLR1B-209ENST00000448770 HLA-DQB2P05538 268 aa13.77□□□□□ -0.21
POLR1B-209ENST00000448770 NR1H2P55055 460 aa13.77□□□□□ -0.21
POLR1B-209ENST00000448770 IHHQ14623 411 aa13.77□□□□□ -0.21
POLR1B-209ENST00000448770 RWDD4Q6NW29 188 aaKnown RBP13.77□□□□□ -0.21
POLR1B-209ENST00000448770 TMEM207Q6UWW9 146 aa13.77□□□□□ -0.21
POLR1B-209ENST00000448770 PIWIL4Q7Z3Z4 852 aaKnown RBP13.77□□□□□ -0.21
POLR1B-209ENST00000448770 CUZD1Q86UP6 607 aa13.77□□□□□ -0.21
POLR1B-209ENST00000448770 FUNDC1Q8IVP5 155 aa13.77□□□□□ -0.21
POLR1B-209ENST00000448770 TSPAN14Q8NG11 270 aa13.77□□□□□ -0.21
POLR1B-209ENST00000448770 RIN3Q8TB24 985 aa13.77□□□□□ -0.21
POLR1B-209ENST00000448770 PHF21BQ96EK2 531 aa13.77□□□□□ -0.21
POLR1B-209ENST00000448770 VAT1Q99536 393 aa13.77□□□□□ -0.21
POLR1B-209ENST00000448770 SIK2Q9H0K1 926 aa13.77□□□□□ -0.21
POLR1B-209ENST00000448770 NOL11Q9H8H0 719 aaKnown RBP13.77□□□□□ -0.21
POLR1B-209ENST00000448770 MEAF6Q9HAF1 191 aa13.77□□□□□ -0.21
POLR1B-209ENST00000448770 NCKIPSDQ9NZQ3 722 aa13.77□□□□□ -0.21
POLR1B-209ENST00000448770 CNOT11Q9UKZ1 510 aaKnown RBP13.77□□□□□ -0.21
POLR1B-209ENST00000448770 COL4A4P53420 1690 aaPredicted RBP13.77□□□□□ -0.21
POLR1B-209ENST00000448770 A0A0J9YVX5 310 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 ARHGEF37A1IGU5 675 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 TMX2-CTNND1H3BSU7 103 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 DLGAP1O14490 977 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 MTSS1O43312 755 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 ALDOCP09972 364 aaKnown RBP13.76□□□□□ -0.21
POLR1B-209ENST00000448770 CPB1P15086 417 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 ATP5F1P24539 256 aaPredicted RBP13.76□□□□□ -0.21
POLR1B-209ENST00000448770 ALDH3B2P48448 385 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 AIF1P55008 147 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 PFKPQ01813 784 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 PPIL2Q13356 520 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 BORAQ6PGQ7 559 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 LDB1Q86U70 411 aaPredicted RBP13.76□□□□□ -0.21
POLR1B-209ENST00000448770 LCA5Q86VQ0 697 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 ANKRD13AQ8IZ07 590 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 SENP8Q96LD8 212 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 TSGA13Q96PP4 275 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 MRPL57Q9BQC6 102 aaKnown RBP13.76□□□□□ -0.21
POLR1B-209ENST00000448770 PAAF1Q9BRP4 392 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 GLOD4Q9HC38 313 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 NSMCE4AQ9NXX6 385 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 FBXO5Q9UKT4 447 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 PSMD12O00232 456 aaPredicted RBP13.76□□□□□ -0.21
POLR1B-209ENST00000448770 PPP6CO00743 305 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 STRNO43815 780 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 MAFKO60675 156 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 GNAO1P09471 354 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 CD151P48509 253 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 HSPA13P48723 471 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 DNAJB13P59910 316 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 DUSP28Q4G0W2 176 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 TMEM259Q4ZIN3 620 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 CPNE9Q8IYJ1 553 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 FIBCD1Q8N539 461 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 SHCBP1Q8NEM2 672 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 CDCA5Q96FF9 252 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 MRGPRX2Q96LB1 330 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 PPP1R10Q96QC0 940 aaKnown RBP13.76□□□□□ -0.21
POLR1B-209ENST00000448770 UHRF1Q96T88 793 aaPredicted RBP13.76□□□□□ -0.21
POLR1B-209ENST00000448770 TRIM8Q9BZR9 551 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 SLC39A8Q9C0K1 460 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 GSTO2Q9H4Y5 243 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 CNGB3Q9NQW8 809 aa13.76□□□□□ -0.21
POLR1B-209ENST00000448770 HEATR9A2RTY3 570 aa13.75□□□□□ -0.21
POLR1B-209ENST00000448770 TRPC5OSA6NMA1 111 aa13.75□□□□□ -0.21
POLR1B-209ENST00000448770 BTBD19C9JJ37 291 aa13.75□□□□□ -0.21
POLR1B-209ENST00000448770 H3BNH8 94 aa13.75□□□□□ -0.21
POLR1B-209ENST00000448770 TREHO43280 583 aa13.75□□□□□ -0.21
POLR1B-209ENST00000448770 HTRA2O43464 458 aaPredicted RBP13.75□□□□□ -0.21
POLR1B-209ENST00000448770 TRMUO75648 421 aaKnown RBP13.75□□□□□ -0.21
POLR1B-209ENST00000448770 ZNF23P17027 643 aa13.75□□□□□ -0.21
POLR1B-209ENST00000448770 LRPAP1P30533 357 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms