RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 ERVK-10P10266 1014 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 GYS2P54840 703 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 GPS2Q13227 327 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 GRAMD4Q6IC98 578 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 DPY19L3Q6ZPD9 716 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 TMEM135Q86UB9 458 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 OR2AP1Q8NGE2 309 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 BLOC1S5Q8TDH9 187 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 ELOVL2Q9NXB9 296 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 PCDHB9Q9Y5E1 797 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 GOLGA6L10A6NI86 522 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 CCL22O00626 93 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 POLBP06746 335 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 SULT2A1Q06520 285 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 PCID2Q5JVF3 399 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 ESRP1Q6NXG1 681 aaKnown RBP25.08■■□□□ 1.61
RFFL-206ENST00000447669 MTERF4Q7Z6M4 381 aaKnown RBP25.08■■□□□ 1.61
RFFL-206ENST00000447669 CTAGE3PQ8IX95 158 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 PHTF2Q8N3S3 785 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 TMEM109Q9BVC6 243 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 BRD9Q9H8M2 597 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 MED4Q9NPJ6 270 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 LIMD1Q9UGP4 676 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 SPO11Q9Y5K1 396 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 KIAA1549LQ6ZVL6 1849 aa25.08■■□□□ 1.61
RFFL-206ENST00000447669 ANHXE9PGG2 379 aa25.07■■□□□ 1.6
RFFL-206ENST00000447669 AURKAO14965 403 aa25.07■■□□□ 1.6
RFFL-206ENST00000447669 NDST3O95803 873 aa25.07■■□□□ 1.6
RFFL-206ENST00000447669 NR1H3Q13133 447 aa25.07■■□□□ 1.6
RFFL-206ENST00000447669 PRPF38BQ5VTL8 546 aaKnown RBP25.07■■□□□ 1.6
RFFL-206ENST00000447669 PKN3Q6P5Z2 889 aa25.07■■□□□ 1.6
RFFL-206ENST00000447669 PPM1NQ8N819 430 aa25.07■■□□□ 1.6
RFFL-206ENST00000447669 PAFAH2Q99487 392 aa25.07■■□□□ 1.6
RFFL-206ENST00000447669 CCDC77Q9BR77 488 aa25.07■■□□□ 1.6
RFFL-206ENST00000447669 KIFC1Q9BW19 673 aa25.07■■□□□ 1.6
RFFL-206ENST00000447669 MOCS1Q9NZB8 636 aa25.07■■□□□ 1.6
RFFL-206ENST00000447669 NOVA2Q9UNW9 492 aaKnown RBP25.07■■□□□ 1.6
RFFL-206ENST00000447669 ARL5AQ9Y689 179 aa25.07■■□□□ 1.6
RFFL-206ENST00000447669 POLR3GO15318 223 aaPredicted RBP25.07■■□□□ 1.6
RFFL-206ENST00000447669 IGSF6O95976 241 aa25.07■■□□□ 1.6
RFFL-206ENST00000447669 DLDP09622 509 aaKnown RBP25.07■■□□□ 1.6
RFFL-206ENST00000447669 TSHRP16473 764 aa25.07■■□□□ 1.6
RFFL-206ENST00000447669 MTSS1LQ765P7 747 aa25.07■■□□□ 1.6
RFFL-206ENST00000447669 FRS2Q8WU20 508 aa25.07■■□□□ 1.6
RFFL-206ENST00000447669 ZDHHC6Q9H6R6 413 aa25.07■■□□□ 1.6
RFFL-206ENST00000447669 TCAF1Q9Y4C2 921 aa25.07■■□□□ 1.6
RFFL-206ENST00000447669 FAM237BA0A1B0GVD1 139 aa25.06■■□□□ 1.6
RFFL-206ENST00000447669 FOSL2P15408 326 aa25.06■■□□□ 1.6
RFFL-206ENST00000447669 CES1P23141 567 aa25.06■■□□□ 1.6
RFFL-206ENST00000447669 CCNHP51946 323 aaPredicted RBP25.06■■□□□ 1.6
RFFL-206ENST00000447669 MYLK3Q32MK0 819 aa25.06■■□□□ 1.6
RFFL-206ENST00000447669 ZSWIM9Q86XI8 627 aa25.06■■□□□ 1.6
RFFL-206ENST00000447669 KRT222Q8N1A0 295 aa25.06■■□□□ 1.6
RFFL-206ENST00000447669 CYTH2Q99418 400 aa25.06■■□□□ 1.6
RFFL-206ENST00000447669 ROPN1BQ9BZX4 212 aaPredicted RBP25.06■■□□□ 1.6
RFFL-206ENST00000447669 ROPN1Q9HAT0 212 aaPredicted RBP25.06■■□□□ 1.6
RFFL-206ENST00000447669 OGFRQ9NZT2 677 aa25.06■■□□□ 1.6
RFFL-206ENST00000447669 TBC1D3BA6NDS4 549 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 WASH3PC4AMC7 463 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 RGS16O15492 202 aaPredicted RBP25.05■■□□□ 1.6
RFFL-206ENST00000447669 USP1O94782 785 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 EPOP01588 193 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 SLC4A1P02730 911 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 HLA-EP13747 358 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 CTPS1P17812 591 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 HLA-DPA1P20036 260 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 PRKCHP24723 683 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 STX2P32856 288 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 SNRPD1P62314 119 aaKnown RBP25.05■■□□□ 1.6
RFFL-206ENST00000447669 TMED2Q15363 201 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 CNGA3Q16281 694 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 ITPRIPL2Q3MIP1 535 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 CARD16Q5EG05 197 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 DEFB123Q8N688 67 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 PNPLA1Q8N8W4 532 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 PPHLN1Q8NEY8 458 aaKnown RBP25.05■■□□□ 1.6
RFFL-206ENST00000447669 OR2A12Q8NGT7 310 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 ATP6V1G3Q96LB4 118 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 EURLQ9NYK6 297 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 FAM169AQ9Y6X4 670 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 F5P12259 2224 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 AP3B1O00203 1094 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 TRAFD1O14545 582 aaPredicted RBP25.05■■□□□ 1.6
RFFL-206ENST00000447669 SPAG6O75602 509 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 TCEA3O75764 348 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 ALDH1A2O94788 518 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 FGF1P05230 155 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 ASGR2P07307 311 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 AP1S1P61966 158 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 SEMG2Q02383 582 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 BCL2L1Q07817 233 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 EMC10Q5UCC4 262 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 TERB1Q8NA31 727 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.05■■□□□ 1.6
RFFL-206ENST00000447669 GRIN3AQ8TCU5 1115 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 AGAP2Q99490 1192 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 NAT9Q9BTE0 207 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 VPS18Q9P253 973 aa25.05■■□□□ 1.6
RFFL-206ENST00000447669 TCF20Q9UGU0 1960 aaKnown RBP25.05■■□□□ 1.6
RFFL-206ENST00000447669 HCN2Q9UL51 889 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms