RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 PAF1Q8N7H5 531 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 TMEM145Q8NBT3 493 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 FEM1CQ96JP0 617 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 ZNF641Q96N77 438 aaPredicted RBP14.97□□□□□ -0.01
HDAC4-204ENST00000446876 NUDCD1Q96RS6 583 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 LGMNQ99538 433 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 MAK16Q9BXY0 300 aaKnown RBP14.97□□□□□ -0.01
HDAC4-204ENST00000446876 SLC17A9Q9BYT1 436 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 NOD2Q9HC29 1040 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 PCDH12Q9NPG4 1184 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 SCUBE2Q9NQ36 999 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 TTLL3Q9Y4R7 772 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 PCDHGC4Q9Y5F7 938 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 SPTBN2O15020 2390 aa14.97□□□□□ -0.01
HDAC4-204ENST00000446876 MACROD2A1Z1Q3 448 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 GRID2IPA4D2P6 1211 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 BTNL10A8MVZ5 291 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 TLR4O00206 839 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 TRAFD1O14545 582 aaPredicted RBP14.96□□□□□ -0.01
HDAC4-204ENST00000446876 KCNK5O95279 499 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 AKT2P31751 481 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 NUDT1P36639 197 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 HSPA9P38646 679 aaKnown RBP14.96□□□□□ -0.01
HDAC4-204ENST00000446876 NOVA1P51513 510 aaKnown RBP14.96□□□□□ -0.01
HDAC4-204ENST00000446876 NXPH1P58417 271 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 ADCY2Q08462 1091 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 ITKQ08881 620 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 TRAF2Q12933 501 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 STAT4Q14765 748 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 UGP2Q16851 508 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 SLC45A4Q5BKX6 768 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 IL27RAQ6UWB1 636 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 GCNT7Q6ZNI0 430 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 VSIG1Q86XK7 387 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 SPATS2Q86XZ4 545 aaKnown RBP14.96□□□□□ -0.01
HDAC4-204ENST00000446876 LRRC49Q8IUZ0 686 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 KATNAL2Q8IYT4 538 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 BBS5Q8N3I7 341 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 TEX26Q8N6G2 289 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 MFSD2AQ8NA29 543 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 CCNYQ8ND76 341 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 MAML1Q92585 1016 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 HDAC11Q96DB2 347 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 ECHDC3Q96DC8 303 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 ZNF830Q96NB3 372 aaPredicted RBP14.96□□□□□ -0.01
HDAC4-204ENST00000446876 CAMK1GQ96NX5 476 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 CAAP1Q9H8G2 361 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 TM7SF3Q9NS93 570 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 SAE1Q9UBE0 346 aaPredicted RBP14.96□□□□□ -0.01
HDAC4-204ENST00000446876 COQ6Q9Y2Z9 468 aa14.96□□□□□ -0.01
HDAC4-204ENST00000446876 CABIN1Q9Y6J0 2220 aa14.96□□□□□ -0.02
HDAC4-204ENST00000446876 KCNK1O00180 336 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 MATN3O15232 486 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 SH3BP5O60239 455 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 HLA-DQB2P05538 268 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 THEGLP0DJG4 465 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 PECAM1P16284 738 aaPredicted RBP14.95□□□□□ -0.02
HDAC4-204ENST00000446876 MX2P20592 715 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 CCNCP24863 283 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 GSDMDP57764 484 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 DSC2Q02487 901 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 ZBTB17Q13105 803 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 HNRNPDQ14103 355 aaKnown RBP14.95□□□□□ -0.02
HDAC4-204ENST00000446876 IHHQ14623 411 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 TAZQ16635 292 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 ZNF423Q2M1K9 1284 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 TIGD7Q6NT04 549 aaPredicted RBP14.95□□□□□ -0.02
HDAC4-204ENST00000446876 BRAT1Q6PJG6 821 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 PIP4P1Q86T03 277 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 CCDC50Q8IVM0 306 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 CCDC13Q8IYE1 715 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 OR13H1Q8NG92 308 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 CXorf40AQ8TE69 158 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 PDCD6IPQ8WUM4 868 aaKnown RBP14.95□□□□□ -0.02
HDAC4-204ENST00000446876 HAUS1Q96CS2 278 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 TSGA13Q96PP4 275 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 KLF6Q99612 283 aaPredicted RBP14.95□□□□□ -0.02
HDAC4-204ENST00000446876 SEMA3CQ99985 751 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 C1QTNF2Q9BXJ5 285 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 CEP41Q9BYV8 373 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 GDF3Q9NR23 364 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 RBM22Q9NW64 420 aaKnown RBP eCLIP14.95□□□□□ -0.027e-7■■■■□ 21.5
HDAC4-204ENST00000446876 ATP8A1Q9Y2Q0 1164 aa14.95□□□□□ -0.02
HDAC4-204ENST00000446876 TDRD6O60522 2096 aaKnown RBP14.95□□□□□ -0.02
HDAC4-204ENST00000446876 CACNA1AO00555 2505 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 hCG_1818297A0A087WSY0 165 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.94□□□□□ -0.02
HDAC4-204ENST00000446876 POM121BA6NF01 834 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 A8MX80 341 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 RIOK3O14730 519 aaKnown RBP14.94□□□□□ -0.02
HDAC4-204ENST00000446876 CST8O60676 142 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 CCNB1P14635 433 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 CTNNA1P35221 906 aaKnown RBP14.94□□□□□ -0.02
HDAC4-204ENST00000446876 MMP12P39900 470 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 CCT8P50990 548 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 FAM193AP78312 1265 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 PPIDQ08752 370 aaKnown RBP14.94□□□□□ -0.02
HDAC4-204ENST00000446876 ELP6Q0PNE2 266 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 AP1B1Q10567 949 aa14.94□□□□□ -0.02
HDAC4-204ENST00000446876 RALGDSQ12967 914 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms