RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 CBX4O00257 560 aa17.58■□□□□ 0.4
SMC6-206ENST00000446852 FCHO1O14526 889 aa17.58■□□□□ 0.4
SMC6-206ENST00000446852 MGRN1O60291 552 aa17.58■□□□□ 0.4
SMC6-206ENST00000446852 GREM1O60565 184 aa17.58■□□□□ 0.4
SMC6-206ENST00000446852 EFCAB14O75071 495 aa17.58■□□□□ 0.4
SMC6-206ENST00000446852 EPOP01588 193 aa17.58■□□□□ 0.4
SMC6-206ENST00000446852 PIRTP0C851 137 aa17.58■□□□□ 0.4
SMC6-206ENST00000446852 STMN1P16949 149 aa17.58■□□□□ 0.4
SMC6-206ENST00000446852 DLG1Q12959 904 aa17.58■□□□□ 0.4
SMC6-206ENST00000446852 PTPRCAPQ14761 206 aa17.58■□□□□ 0.4
SMC6-206ENST00000446852 RNF219Q5W0B1 726 aaPredicted RBP17.58■□□□□ 0.4
SMC6-206ENST00000446852 PTAR1Q7Z6K3 402 aaPredicted RBP17.58■□□□□ 0.4
SMC6-206ENST00000446852 RNF135Q8IUD6 432 aa17.58■□□□□ 0.4
SMC6-206ENST00000446852 ARL14EPQ8N8R7 260 aaPredicted RBP17.58■□□□□ 0.4
SMC6-206ENST00000446852 BLOC1S5Q8TDH9 187 aa17.58■□□□□ 0.4
SMC6-206ENST00000446852 UTP4Q969X6 686 aaKnown RBP17.58■□□□□ 0.4
SMC6-206ENST00000446852 EBF4Q9BQW3 602 aa17.58■□□□□ 0.4
SMC6-206ENST00000446852 ARL8BQ9NVJ2 186 aa17.58■□□□□ 0.4
SMC6-206ENST00000446852 ARL5AQ9Y689 179 aa17.58■□□□□ 0.4
SMC6-206ENST00000446852 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.57■□□□□ 0.4
SMC6-206ENST00000446852 SLC7A4O43246 635 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 BUD23O43709 281 aaKnown RBP17.57■□□□□ 0.4
SMC6-206ENST00000446852 FGF18O76093 207 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 CNPP09543 421 aaKnown RBP17.57■□□□□ 0.4
SMC6-206ENST00000446852 LINC00271P0C7V0 271 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 CR2P20023 1033 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 PPM1AP35813 382 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 LEPRP48357 1165 aaKnown RBP17.57■□□□□ 0.4
SMC6-206ENST00000446852 POLD2P49005 469 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 ABCE1P61221 599 aaKnown RBP17.57■□□□□ 0.4
SMC6-206ENST00000446852 FSCBQ5H9T9 825 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 CILP2Q8IUL8 1156 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 BBS5Q8N3I7 341 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 CALML6Q8TD86 181 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 ARMC5Q96C12 935 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 GPR78Q96P69 363 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 NDNQ99608 321 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 OMDQ99983 421 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 WWP1Q9H0M0 922 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 ZBP1Q9H171 429 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 MARCH4Q9P2E8 410 aaPredicted RBP17.57■□□□□ 0.4
SMC6-206ENST00000446852 ACOT9Q9Y305 439 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 OLFM2O95897 454 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 CA8P35219 290 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 ARF5P84085 180 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 CYTH1Q15438 398 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 FBXO46Q6PJ61 603 aaPredicted RBP17.57■□□□□ 0.4
SMC6-206ENST00000446852 MAVSQ7Z434 540 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 LDB1Q86U70 411 aaPredicted RBP17.57■□□□□ 0.4
SMC6-206ENST00000446852 SPATA6LQ8N4H0 392 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 OR6P1Q8NGX9 317 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 MUC3BQ9H195 1237 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 MFSD1Q9H3U5 465 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 SUDS3Q9H7L9 328 aaPredicted RBP17.57■□□□□ 0.4
SMC6-206ENST00000446852 PNPOQ9NVS9 261 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.57■□□□□ 0.4
SMC6-206ENST00000446852 ARMCX1Q9P291 453 aa17.57■□□□□ 0.4
SMC6-206ENST00000446852 RUVBL2Q9Y230 463 aaKnown RBP17.57■□□□□ 0.4
SMC6-206ENST00000446852 TGM5O43548 720 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 C1RP00736 705 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 SCNN1BP51168 640 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 ACVR1Q04771 509 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 HERC6Q8IVU3 1022 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 PARP9Q8IXQ6 854 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 FSTL5Q8N475 847 aaPredicted RBP17.56■□□□□ 0.4
SMC6-206ENST00000446852 TMEM199Q8N511 208 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 INPP5DQ92835 1189 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 PTCD3Q96EY7 689 aaKnown RBP17.56■□□□□ 0.4
SMC6-206ENST00000446852 DNAJC1Q96KC8 554 aaKnown RBP17.56■□□□□ 0.4
SMC6-206ENST00000446852 OLFM1Q99784 485 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.56■□□□□ 0.4
SMC6-206ENST00000446852 OXSMQ9NWU1 459 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 TARM1B6A8C7 271 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 NDST3O95803 873 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 CD160O95971 181 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 COL6A2P12110 1019 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 PRAMEP78395 509 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 POU4F1Q01851 419 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 GAREM2Q75VX8 874 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 LCA5Q86VQ0 697 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.56■□□□□ 0.4
SMC6-206ENST00000446852 NXNL1Q96CM4 212 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 MOCOSQ96EN8 888 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 TBATAQ96M53 351 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 DDX50Q9BQ39 737 aaKnown RBP17.56■□□□□ 0.4
SMC6-206ENST00000446852 UNKQ9C0B0 810 aaKnown RBP17.56■□□□□ 0.4
SMC6-206ENST00000446852 PCDHB12Q9Y5F1 795 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 CPQQ9Y646 472 aa17.56■□□□□ 0.4
SMC6-206ENST00000446852 NRG2O14511 850 aaPredicted RBP17.55■□□□□ 0.4
SMC6-206ENST00000446852 INSIG1O15503 277 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 SNAP91O60641 907 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 TBL1XO60907 577 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 BAIAP3O94812 1187 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 APOA4P06727 396 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 CRABP2P29373 138 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 CYP4F8P98187 520 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 RFTN1Q14699 578 aaPredicted RBP17.55■□□□□ 0.4
SMC6-206ENST00000446852 LRRC8EQ6NSJ5 796 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 LINGO4Q6UY18 593 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 ZYG11AQ6WRX3 759 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms