RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 RETREG1Q9H6L5 497 aa14.57□□□□□ -0.08
HMGN1-208ENST00000443046 NDFIP2Q9NV92 336 aa14.57□□□□□ -0.08
HMGN1-208ENST00000443046 WDR70Q9NW82 654 aa14.57□□□□□ -0.08
HMGN1-208ENST00000443046 MAN1B1Q9UKM7 699 aa14.57□□□□□ -0.08
HMGN1-208ENST00000443046 DOLKQ9UPQ8 538 aa14.57□□□□□ -0.08
HMGN1-208ENST00000443046 ARHGEF17Q96PE2 2063 aaPredicted RBP14.56□□□□□ -0.08
HMGN1-208ENST00000443046 UNC79Q9P2D8 2635 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 BICDL2A1A5D9 508 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 KRIT1O00522 736 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 RASGRP1O95267 797 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 GP1BBP13224 206 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 TIMP2P16035 220 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 GLB1P16278 677 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 ITIH2P19823 946 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 CDH5P33151 784 aaPredicted RBP14.56□□□□□ -0.08
HMGN1-208ENST00000443046 CLCN1P35523 988 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 USP8P40818 1118 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 RNASE9P60153 205 aaKnown RBP14.56□□□□□ -0.08
HMGN1-208ENST00000443046 SNRPD1P62314 119 aaKnown RBP14.56□□□□□ -0.08
HMGN1-208ENST00000443046 NFATC4Q14934 902 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 ARHGAP44Q17R89 818 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 WSCD2Q2TBF2 565 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 TMEM52BQ4KMG9 183 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 CERCAMQ5T4B2 595 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 MANEALQ5VSG8 457 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 KCTD16Q68DU8 428 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 ISM2Q6H9L7 571 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 GDPD4Q6W3E5 623 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 NLRP14Q86W24 1093 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 CCNJLQ8IV13 435 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 DRC7Q8IY82 874 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 ELOA2Q8IYF1 753 aaPredicted RBP14.56□□□□□ -0.08
HMGN1-208ENST00000443046 RYBPQ8N488 228 aaPredicted RBP14.56□□□□□ -0.08
HMGN1-208ENST00000443046 USP7Q93009 1102 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 RBM15Q96T37 977 aaKnown RBP eCLIP14.56□□□□□ -0.08
HMGN1-208ENST00000443046 CRACR2AQ9BSW2 395 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 SLC12A9Q9BXP2 914 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 DKK3Q9UBP4 350 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 APEX2Q9UBZ4 518 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 SEPT3Q9UH03 358 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 MFHAS1Q9Y4C4 1052 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 ATP6V1DQ9Y5K8 247 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 DGKBQ9Y6T7 804 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 MYO9AB2RTY4 2548 aa14.56□□□□□ -0.08
HMGN1-208ENST00000443046 CTSEP14091 401 aa14.55□□□□□ -0.08
HMGN1-208ENST00000443046 FLT3P36888 993 aa14.55□□□□□ -0.08
HMGN1-208ENST00000443046 ETFBP38117 255 aa14.55□□□□□ -0.08
HMGN1-208ENST00000443046 GEMIN4P57678 1058 aaKnown RBP14.55□□□□□ -0.08
HMGN1-208ENST00000443046 SRP54P61011 504 aaKnown RBP14.55□□□□□ -0.08
HMGN1-208ENST00000443046 NRG1Q02297 640 aaPredicted RBP14.55□□□□□ -0.08
HMGN1-208ENST00000443046 PTK2Q05397 1052 aa14.55□□□□□ -0.08
HMGN1-208ENST00000443046 POLD3Q15054 466 aaPredicted RBP14.55□□□□□ -0.08
HMGN1-208ENST00000443046 AGERQ15109 404 aa14.55□□□□□ -0.08
HMGN1-208ENST00000443046 LRRC73Q5JTD7 316 aa14.55□□□□□ -0.08
HMGN1-208ENST00000443046 KLHL10Q6JEL2 608 aa14.55□□□□□ -0.08
HMGN1-208ENST00000443046 SPRED1Q7Z699 444 aa14.55□□□□□ -0.08
HMGN1-208ENST00000443046 SLC47A2Q86VL8 602 aa14.55□□□□□ -0.08
HMGN1-208ENST00000443046 XYLT1Q86Y38 959 aa14.55□□□□□ -0.08
HMGN1-208ENST00000443046 ZNF564Q8TBZ8 553 aaPredicted RBP14.55□□□□□ -0.08
HMGN1-208ENST00000443046 CXorf40AQ8TE69 158 aa14.55□□□□□ -0.08
HMGN1-208ENST00000443046 CMKLR1Q99788 373 aa14.55□□□□□ -0.08
HMGN1-208ENST00000443046 SYNCQ9H7C4 482 aa14.55□□□□□ -0.08
HMGN1-208ENST00000443046 TMEM59LQ9UK28 342 aa14.55□□□□□ -0.08
HMGN1-208ENST00000443046 NEU3Q9UQ49 428 aa14.55□□□□□ -0.08
HMGN1-208ENST00000443046 PCDHB11Q9Y5F2 797 aa14.55□□□□□ -0.08
HMGN1-208ENST00000443046 RNF215Q9Y6U7 377 aa14.55□□□□□ -0.08
HMGN1-208ENST00000443046 CR2P20023 1033 aa14.54□□□□□ -0.08
HMGN1-208ENST00000443046 KRT9P35527 623 aa14.54□□□□□ -0.08
HMGN1-208ENST00000443046 MAPKAPK2P49137 400 aa14.54□□□□□ -0.08
HMGN1-208ENST00000443046 SUOXP51687 545 aa14.54□□□□□ -0.08
HMGN1-208ENST00000443046 ARSDP51689 593 aa14.54□□□□□ -0.08
HMGN1-208ENST00000443046 FOXK1P85037 733 aa14.54□□□□□ -0.08
HMGN1-208ENST00000443046 HLTFQ14527 1009 aaKnown RBP eCLIP14.54□□□□□ -0.08
HMGN1-208ENST00000443046 LRRC14Q15048 493 aa14.54□□□□□ -0.08
HMGN1-208ENST00000443046 ATXN7L2Q5T6C5 722 aaPredicted RBP14.54□□□□□ -0.08
HMGN1-208ENST00000443046 ENPP7Q6UWV6 458 aa14.54□□□□□ -0.08
HMGN1-208ENST00000443046 ARCQ7LC44 396 aa14.54□□□□□ -0.08
HMGN1-208ENST00000443046 Q8N9G6 341 aaPredicted RBP14.54□□□□□ -0.08
HMGN1-208ENST00000443046 WRAP53Q9BUR4 548 aaKnown RBP14.54□□□□□ -0.08
HMGN1-208ENST00000443046 APOOQ9BUR5 198 aa14.54□□□□□ -0.08
HMGN1-208ENST00000443046 TTYH3Q9C0H2 523 aa14.54□□□□□ -0.08
HMGN1-208ENST00000443046 EPN3Q9H201 632 aa14.54□□□□□ -0.08
HMGN1-208ENST00000443046 MAGEH1Q9H213 219 aa14.54□□□□□ -0.08
HMGN1-208ENST00000443046 PLCB1Q9NQ66 1216 aa14.54□□□□□ -0.08
HMGN1-208ENST00000443046 TUBD1Q9UJT1 453 aa14.54□□□□□ -0.08
HMGN1-208ENST00000443046 AJAP1Q9UKB5 411 aaPredicted RBP14.54□□□□□ -0.08
HMGN1-208ENST00000443046 ZFC3H1O60293 1989 aaKnown RBP14.54□□□□□ -0.08
HMGN1-208ENST00000443046 ITPR2Q14571 2701 aa14.53□□□□□ -0.08
HMGN1-208ENST00000443046 SPTBN1Q01082 2364 aaKnown RBP14.53□□□□□ -0.08
HMGN1-208ENST00000443046 FOXN3O00409 490 aaPredicted RBP14.53□□□□□ -0.08
HMGN1-208ENST00000443046 KDELR3O43731 214 aa14.53□□□□□ -0.08
HMGN1-208ENST00000443046 NUDT21O43809 227 aaKnown RBP14.53□□□□□ -0.08
HMGN1-208ENST00000443046 RHOQP17081 205 aa14.53□□□□□ -0.08
HMGN1-208ENST00000443046 PON1P27169 355 aa14.53□□□□□ -0.08
HMGN1-208ENST00000443046 HTR1BP28222 390 aa14.53□□□□□ -0.08
HMGN1-208ENST00000443046 B4GALNT1Q00973 533 aa14.53□□□□□ -0.08
HMGN1-208ENST00000443046 INPP5AQ14642 412 aa14.53□□□□□ -0.08
HMGN1-208ENST00000443046 C16orf72Q14CZ0 275 aa14.53□□□□□ -0.08
HMGN1-208ENST00000443046 TCEA2Q15560 299 aa14.53□□□□□ -0.08
HMGN1-208ENST00000443046 BORAQ6PGQ7 559 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms