RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 IGHV1OR21-1A0A087WYE8 117 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 A0A1W2PQH9 124 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 PP2D1A8MPX8 630 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 KLHL41O60662 606 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 NDUFA10O95299 355 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 MT-ND3P03897 115 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 HOXD4P09016 255 aaPredicted RBP7.27□□□□□ -1.25
SSXP3-201ENST00000442971 TRIM49P0CI25 452 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 TRIM49CP0CI26 452 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 MAPTP10636 758 aaKnown RBP7.27□□□□□ -1.25
SSXP3-201ENST00000442971 BMP6P22004 513 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 WARSP23381 471 aaKnown RBP7.27□□□□□ -1.25
SSXP3-201ENST00000442971 NNMTP40261 264 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 ACOT2P49753 483 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 STK19P49842 368 aaPredicted RBP7.27□□□□□ -1.25
SSXP3-201ENST00000442971 MAZP56270 477 aaKnown RBP7.27□□□□□ -1.25
SSXP3-201ENST00000442971 NR5A1Q13285 461 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 NNTQ13423 1086 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 MYBPC3Q14896 1274 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 ALG11Q2TAA5 492 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 MIDNQ504T8 468 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 EFHC1Q5JVL4 640 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 Q5PR19 223 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 UBAP2Q5T6F2 1119 aaKnown RBP7.27□□□□□ -1.25
SSXP3-201ENST00000442971 B3GNTL1Q67FW5 361 aaPredicted RBP7.27□□□□□ -1.25
SSXP3-201ENST00000442971 SPECC1LQ69YQ0 1117 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 LIAT1Q6ZQX7 453 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 TAF8Q7Z7C8 310 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 CDC20BQ86Y33 519 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 ZNF557Q8N988 423 aaPredicted RBP7.27□□□□□ -1.25
SSXP3-201ENST00000442971 TMEM161BQ8NDZ6 487 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 FIBINQ8TAL6 211 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 COG1Q8WTW3 980 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 FRS2Q8WU20 508 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 NR4A3Q92570 626 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 SGSM3Q96HU1 749 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 RBM15Q96T37 977 aaKnown RBP eCLIP7.27□□□□□ -1.25
SSXP3-201ENST00000442971 NTPCRQ9BSD7 190 aaKnown RBP7.27□□□□□ -1.25
SSXP3-201ENST00000442971 MSTO1Q9BUK6 570 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 BRD8Q9H0E9 1235 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 DMAP1Q9NPF5 467 aaPredicted RBP7.27□□□□□ -1.25
SSXP3-201ENST00000442971 LNPEPQ9UIQ6 1025 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 SCML2Q9UQR0 700 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 PLEKHM1Q9Y4G2 1056 aa7.27□□□□□ -1.25
SSXP3-201ENST00000442971 MCF2LO15068 1137 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 ALOX15BO15296 676 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 TBL1XO60907 577 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 HIP1RO75146 1068 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 GADD45BO75293 160 aaPredicted RBP7.26□□□□□ -1.25
SSXP3-201ENST00000442971 BRAFP15056 766 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 BMP7P18075 431 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 PDIA3P30101 505 aaKnown RBP7.26□□□□□ -1.25
SSXP3-201ENST00000442971 GNL1P36915 607 aaPredicted RBP7.26□□□□□ -1.25
SSXP3-201ENST00000442971 LIG4P49917 911 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 AKAP17AQ02040 695 aaKnown RBP7.26□□□□□ -1.25
SSXP3-201ENST00000442971 RBPJQ06330 500 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 EFEMP1Q12805 493 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 ZNF169Q14929 603 aaPredicted RBP7.26□□□□□ -1.25
SSXP3-201ENST00000442971 ZNF174Q15697 407 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 C3AR1Q16581 482 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 HIF1AQ16665 826 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 PITRM1Q5JRX3 1037 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 MPP7Q5T2T1 576 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 NT5DC4Q86YG4 428 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 RASGRP3Q8IV61 690 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 MFN1Q8IWA4 741 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 PLD6Q8N2A8 252 aaKnown RBP7.26□□□□□ -1.25
SSXP3-201ENST00000442971 C1orf127Q8N9H9 656 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 DENND6BQ8NEG7 585 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 ATL2Q8NHH9 583 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 DNAJB14Q8TBM8 379 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 PPP4R1Q8TF05 950 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 WASF1Q92558 559 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 SDCCAG3Q96C92 435 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 ZMYND19Q96E35 227 aaPredicted RBP7.26□□□□□ -1.25
SSXP3-201ENST00000442971 C1QTNF2Q9BXJ5 285 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 SH3GLB2Q9NR46 395 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 C1GALT1Q9NS00 363 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 RASSF1Q9NS23 344 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 TINAGQ9UJW2 476 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 FARSAQ9Y285 508 aaKnown RBP7.26□□□□□ -1.25
SSXP3-201ENST00000442971 MEMO1Q9Y316 297 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 NME7Q9Y5B8 376 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 CYP46A1Q9Y6A2 500 aa7.26□□□□□ -1.25
SSXP3-201ENST00000442971 FAM237BA0A1B0GVD1 139 aa7.25□□□□□ -1.25
SSXP3-201ENST00000442971 GOLGA6L3A6NEY3 463 aa7.25□□□□□ -1.25
SSXP3-201ENST00000442971 TRIM64A6NGJ6 449 aa7.25□□□□□ -1.25
SSXP3-201ENST00000442971 TRIM64BA6NI03 449 aa7.25□□□□□ -1.25
SSXP3-201ENST00000442971 KPNA3O00505 521 aaPredicted RBP7.25□□□□□ -1.25
SSXP3-201ENST00000442971 CLIC2O15247 247 aa7.25□□□□□ -1.25
SSXP3-201ENST00000442971 SLC19A2O60779 497 aa7.25□□□□□ -1.25
SSXP3-201ENST00000442971 CD2BP2O95400 341 aaKnown RBP7.25□□□□□ -1.25
SSXP3-201ENST00000442971 OR52Z1P0C646 297 aa7.25□□□□□ -1.25
SSXP3-201ENST00000442971 VAV2P52735 878 aa7.25□□□□□ -1.25
SSXP3-201ENST00000442971 TFAMQ00059 246 aaKnown RBP7.25□□□□□ -1.25
SSXP3-201ENST00000442971 SRSF2Q01130 221 aaKnown RBP7.25□□□□□ -1.25
SSXP3-201ENST00000442971 KRTAP1-1Q07627 177 aa7.25□□□□□ -1.25
SSXP3-201ENST00000442971 PCBP2Q15366 365 aaKnown RBP eCLIP7.25□□□□□ -1.25
SSXP3-201ENST00000442971 CHRFAM7AQ494W8 412 aa7.25□□□□□ -1.25
SSXP3-201ENST00000442971 HEPHL1Q6MZM0 1159 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms