RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 SIKE1Q9BRV8 207 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 TUBB6Q9BUF5 446 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 LRRC3Q9BY71 257 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 SLC2A11Q9BYW1 496 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 PLAC1Q9HBJ0 212 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 SLC17A7Q9P2U7 560 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 ACOT9Q9Y305 439 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 RAI2Q9Y5P3 530 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 FAM95CA0A1B0GW59 222 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 CCDC78A2IDD5 438 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 CCT8L1PA6NM43 557 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 FOXO6A8MYZ6 492 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 PIAS1O75925 651 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 CSPG5O95196 566 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 IL1BP01584 269 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 BPGMP07738 259 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 TCF3P15923 654 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 LPOP22079 712 aaPredicted RBP6.07□□□□□ -1.44
VPS50-205ENST00000441602 FOXN2P32314 431 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 CHRNA4P43681 627 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 PLK1P53350 603 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 ZBTB16Q05516 673 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 BCL2L1Q07817 233 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 CYTH1Q15438 398 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 TEAD2Q15562 447 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 FASTKD1Q53R41 847 aaKnown RBP6.07□□□□□ -1.44
VPS50-205ENST00000441602 CXorf57Q6NSI4 855 aaKnown RBP6.07□□□□□ -1.44
VPS50-205ENST00000441602 GLT6D1Q7Z4J2 308 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 GPATCH11Q8N954 259 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 C2CD4AQ8NCU7 369 aaPredicted RBP6.07□□□□□ -1.44
VPS50-205ENST00000441602 WFIKKN2Q8TEU8 576 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 SMG7Q92540 1137 aaKnown RBP6.07□□□□□ -1.44
VPS50-205ENST00000441602 TCF12Q99081 682 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 FEM1AQ9BSK4 669 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 ATP13A3Q9H7F0 1226 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 TLE6Q9H808 572 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 TREX1Q9NSU2 369 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 TDP1Q9NUW8 608 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 VPS51Q9UID3 782 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 RRP15Q9Y3B9 282 aaKnown RBP6.07□□□□□ -1.44
VPS50-205ENST00000441602 GREB1Q4ZG55 1949 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 H0YHG0 523 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 PLIN3O60664 434 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 ATP5HO75947 161 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 TGDSO95455 350 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 SERPINE1P05121 402 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 MYL2P10916 166 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 CPA3P15088 417 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 SERPINA4P29622 427 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 ERVK-21P61565 698 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 FAM182AQ5T1J6 154 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 ARTNQ5T4W7 220 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 RNF43Q68DV7 783 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 FAM45BPQ6NSW5 357 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 ZC3HC1Q86WB0 502 aaKnown RBP6.06□□□□□ -1.44
VPS50-205ENST00000441602 BBS7Q8IWZ6 715 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 UNC5BQ8IZJ1 945 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 PGBD5Q8N414 524 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 FAM45AQ8TCE6 357 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 MYO19Q96H55 970 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 TRIM56Q9BRZ2 755 aaKnown RBP6.06□□□□□ -1.44
VPS50-205ENST00000441602 C17orf80Q9BSJ5 609 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 SLC46A2Q9BY10 475 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 KDM4CQ9H3R0 1056 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 NOD2Q9HC29 1040 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 CATSPERZQ9NTU4 200 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 MTO1Q9Y2Z2 717 aaKnown RBP6.06□□□□□ -1.44
VPS50-205ENST00000441602 PKP3Q9Y446 797 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 KIAA0100Q14667 2235 aaKnown RBP6.06□□□□□ -1.44
VPS50-205ENST00000441602 MYO18AQ92614 2054 aaKnown RBP6.06□□□□□ -1.44
VPS50-205ENST00000441602 SHROOM3Q8TF72 1996 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 HIDE1A8MVS5 230 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 F8W8V4 182 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 SOCS5O75159 536 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 NDUFS3O75489 264 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 SNUPNO95149 360 aaKnown RBP6.06□□□□□ -1.44
VPS50-205ENST00000441602 MMP2P08253 660 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 ATXN1LP0C7T5 689 aaKnown RBP6.06□□□□□ -1.44
VPS50-205ENST00000441602 SAT1P21673 171 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 GRIA4P48058 902 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 RAB10P61026 200 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 E2F5Q15329 346 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 CHI3L2Q15782 390 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 QPCTQ16769 361 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 FAM83EQ2M2I3 478 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 PLEKHG6Q3KR16 790 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 AGAP9Q5VTM2 703 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 FSTL4Q6MZW2 842 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 NCEH1Q6PIU2 408 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 TPGS1Q6ZTW0 290 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 WDR75Q8IWA0 830 aaKnown RBP6.06□□□□□ -1.44
VPS50-205ENST00000441602 CELF5Q8N6W0 485 aaKnown RBP6.06□□□□□ -1.44
VPS50-205ENST00000441602 PDCD6IPQ8WUM4 868 aaKnown RBP6.06□□□□□ -1.44
VPS50-205ENST00000441602 HDAC10Q969S8 669 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 CCDC126Q96EE4 140 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 MYEOVQ96EZ4 313 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 ATXN7L3BQ96GX2 97 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 C7orf26Q96N11 449 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 SLC22A12Q96S37 553 aa6.06□□□□□ -1.44
VPS50-205ENST00000441602 BBS2Q9BXC9 721 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms