RNA–Protein interactions for RNA: ENST00000440447.2

PTX4-202, Transcript of pentraxin 4, humanhuman

TSL 5 BASIC

Gene PTX4, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-202ENST00000440447 ASCL5Q7RTU5 278 aa18.42■□□□□ 0.54
PTX4-202ENST00000440447 ZNF567Q8N184 647 aa18.42■□□□□ 0.54
PTX4-202ENST00000440447 SLC35B2Q8TB61 432 aa18.42■□□□□ 0.54
PTX4-202ENST00000440447 RUBCNQ92622 972 aa18.42■□□□□ 0.54
PTX4-202ENST00000440447 PIGKQ92643 395 aa18.42■□□□□ 0.54
PTX4-202ENST00000440447 BIRC7Q96CA5 298 aa18.42■□□□□ 0.54
PTX4-202ENST00000440447 TRIM44Q96DX7 344 aaPredicted RBP18.42■□□□□ 0.54
PTX4-202ENST00000440447 FEM1CQ96JP0 617 aa18.42■□□□□ 0.54
PTX4-202ENST00000440447 PCDHB9Q9Y5E1 797 aa18.42■□□□□ 0.54
PTX4-202ENST00000440447 DMDP11532 3685 aa18.42■□□□□ 0.54
PTX4-202ENST00000440447 SHROOM3Q8TF72 1996 aa18.42■□□□□ 0.54
PTX4-202ENST00000440447 CPP00450 1065 aa18.41■□□□□ 0.54
PTX4-202ENST00000440447 IGHV4-34P06331 123 aa18.41■□□□□ 0.54
PTX4-202ENST00000440447 MAOBP27338 520 aa18.41■□□□□ 0.54
PTX4-202ENST00000440447 PPP2CBP62714 309 aa18.41■□□□□ 0.54
PTX4-202ENST00000440447 PPP2CAP67775 309 aa18.41■□□□□ 0.54
PTX4-202ENST00000440447 SKOR1P84550 965 aa18.41■□□□□ 0.54
PTX4-202ENST00000440447 ELP6Q0PNE2 266 aa18.41■□□□□ 0.54
PTX4-202ENST00000440447 LRRC73Q5JTD7 316 aa18.41■□□□□ 0.54
PTX4-202ENST00000440447 PRPF39Q86UA1 669 aaKnown RBP18.41■□□□□ 0.54
PTX4-202ENST00000440447 TRIM69Q86WT6 500 aa18.41■□□□□ 0.54
PTX4-202ENST00000440447 ZSWIM9Q86XI8 627 aa18.41■□□□□ 0.54
PTX4-202ENST00000440447 SYT12Q8IV01 421 aa18.41■□□□□ 0.54
PTX4-202ENST00000440447 C17orf53Q8N3J3 647 aaPredicted RBP18.41■□□□□ 0.54
PTX4-202ENST00000440447 C1orf54Q8WWF1 131 aa18.41■□□□□ 0.54
PTX4-202ENST00000440447 ATG4AQ8WYN0 398 aa18.41■□□□□ 0.54
PTX4-202ENST00000440447 DNASE2BQ8WZ79 361 aa18.41■□□□□ 0.54
PTX4-202ENST00000440447 IMP4Q96G21 291 aaKnown RBP18.41■□□□□ 0.54
PTX4-202ENST00000440447 OSBPL9Q96SU4 736 aa18.41■□□□□ 0.54
PTX4-202ENST00000440447 RBM15Q96T37 977 aaKnown RBP eCLIP18.41■□□□□ 0.54
PTX4-202ENST00000440447 HINFPQ9BQA5 517 aa18.41■□□□□ 0.54
PTX4-202ENST00000440447 MIR1-1HGQ9H1L0 117 aa18.41■□□□□ 0.54
PTX4-202ENST00000440447 EIF2B4Q9UI10 523 aaKnown RBP18.41■□□□□ 0.54
PTX4-202ENST00000440447 DNPEPQ9ULA0 475 aa18.41■□□□□ 0.54
PTX4-202ENST00000440447 SNX12Q9UMY4 172 aa18.41■□□□□ 0.54
PTX4-202ENST00000440447 MYO15AQ9UKN7 3530 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 A0A1W2PQU0 124 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 CFAP69A5D8W1 941 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 AREL1O15033 823 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 LIASO43766 372 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 PGLSO95336 258 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 MMP2P08253 660 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 NFKB1P19838 968 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 NFKBIAP25963 317 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 CD27P26842 260 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 MAT2AP31153 395 aaKnown RBP18.4■□□□□ 0.54
PTX4-202ENST00000440447 CD68P34810 354 aaPredicted RBP18.4■□□□□ 0.54
PTX4-202ENST00000440447 MPLP40238 635 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 RPS21P63220 83 aaKnown RBP18.4■□□□□ 0.54
PTX4-202ENST00000440447 HS1BP3Q53T59 392 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 ITPRIPL1Q6GPH6 555 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 KIAA1161Q6NSJ0 714 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 ZSCAN30Q86W11 494 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 HORMAD1Q86X24 394 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 NDUFAF2Q8N183 169 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 RASGEF1CQ8N431 466 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 SPOCK2Q92563 424 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 WDR24Q96S15 920 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 NAP1L3Q99457 506 aaPredicted RBP18.4■□□□□ 0.54
PTX4-202ENST00000440447 NAPGQ99747 312 aaPredicted RBP18.4■□□□□ 0.54
PTX4-202ENST00000440447 TDRD1Q9BXT4 1180 aaKnown RBP18.4■□□□□ 0.54
PTX4-202ENST00000440447 USP29Q9HBJ7 922 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 PCDH12Q9NPG4 1184 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 RSPH14Q9UHP6 348 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 PILRBQ9UKJ0 227 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 PHTF1Q9UMS5 762 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 ITM2BQ9Y287 266 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 ZKSCAN5Q9Y2L8 839 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 ATXN2Q99700 1313 aaKnown RBP18.4■□□□□ 0.54
PTX4-202ENST00000440447 ABCA7Q8IZY2 2146 aa18.4■□□□□ 0.54
PTX4-202ENST00000440447 A0A1W2PPC4 97 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 CTAGE9A4FU28 777 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 C10orf142B7Z368 130 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 CES2O00748 559 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 RIOK3O14730 519 aaKnown RBP18.39■□□□□ 0.53
PTX4-202ENST00000440447 LATO43561 262 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 GFRA3O60609 400 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 GNSP15586 552 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 TCP1P17987 556 aaKnown RBP18.39■□□□□ 0.53
PTX4-202ENST00000440447 ITIH2P19823 946 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 HOXD12P35452 270 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 NUDT1P36639 197 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 EPHB1P54762 984 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 FAM193AP78312 1265 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 IHHQ14623 411 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 SIX1Q15475 284 aaPredicted RBP18.39■□□□□ 0.53
PTX4-202ENST00000440447 SLC14A2Q15849 920 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 CCNG2Q16589 344 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 TMEM52BQ4KMG9 183 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 ANKRD20A2Q5SQ80 823 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 ANKRD20A1Q5TYW2 823 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 ANKRD20A3Q5VUR7 823 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 FAM71DQ8N9W8 422 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 SPATA22Q8NHS9 363 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 CXorf40AQ8TE69 158 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 SPATA13Q96N96 652 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 FCRL5Q96RD9 977 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 TMEM121Q9BTD3 319 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 PCDH9Q9HC56 1237 aa18.39■□□□□ 0.53
PTX4-202ENST00000440447 HOMER3Q9NSC5 361 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms