RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 IL17RCQ8NAC3 791 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 PDCD6IPQ8WUM4 868 aaKnown RBP20.88■□□□□ 0.93
CHD3-204ENST00000439235 NELL2Q99435 816 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 SUV39H2Q9H5I1 410 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 FBRSQ9HAH7 460 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 LTB4R2Q9NPC1 389 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 PRSS16Q9NQE7 514 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 BFARQ9NZS9 450 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 RPL26L1Q9UNX3 145 aaKnown RBP20.88■□□□□ 0.93
CHD3-204ENST00000439235 CHKBQ9Y259 395 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 WASF2Q9Y6W5 498 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 XIRP2A4UGR9 3374 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 KANSL1LA0AUZ9 987 aa20.87■□□□□ 0.93
CHD3-204ENST00000439235 ANTXRLA6NF34 631 aa20.87■□□□□ 0.93
CHD3-204ENST00000439235 C1QTNF3-AMACRE9PGA6 284 aa20.87■□□□□ 0.93
CHD3-204ENST00000439235 TRAFD1O14545 582 aaPredicted RBP20.87■□□□□ 0.93
CHD3-204ENST00000439235 FZD6O60353 706 aa20.87■□□□□ 0.93
CHD3-204ENST00000439235 LEFTY1O75610 366 aa20.87■□□□□ 0.93
CHD3-204ENST00000439235 CPP00450 1065 aa20.87■□□□□ 0.93
CHD3-204ENST00000439235 UGT2B4P06133 528 aa20.87■□□□□ 0.93
CHD3-204ENST00000439235 ATXN1LP0C7T5 689 aaKnown RBP20.87■□□□□ 0.93
CHD3-204ENST00000439235 HOXB2P14652 356 aa20.87■□□□□ 0.93
CHD3-204ENST00000439235 GRIA1P42261 906 aa20.87■□□□□ 0.93
CHD3-204ENST00000439235 MAGEA3P43357 314 aa20.87■□□□□ 0.93
CHD3-204ENST00000439235 NPY2RP49146 381 aa20.87■□□□□ 0.93
CHD3-204ENST00000439235 EPHB1P54762 984 aa20.87■□□□□ 0.93
CHD3-204ENST00000439235 OLIG2Q13516 323 aa20.87■□□□□ 0.93
CHD3-204ENST00000439235 CAMK2GQ13555 558 aaPredicted RBP20.87■□□□□ 0.93
CHD3-204ENST00000439235 BBS9Q3SYG4 887 aa20.87■□□□□ 0.93
CHD3-204ENST00000439235 SLC25A41Q8N5S1 370 aa20.87■□□□□ 0.93
CHD3-204ENST00000439235 TXNDC5Q8NBS9 432 aaKnown RBP20.87■□□□□ 0.93
CHD3-204ENST00000439235 TMIEQ8NEW7 156 aa20.87■□□□□ 0.93
CHD3-204ENST00000439235 LPCAT1Q8NF37 534 aa20.87■□□□□ 0.93
CHD3-204ENST00000439235 LRRC39Q96DD0 335 aa20.87■□□□□ 0.93
CHD3-204ENST00000439235 PCDHB9Q9Y5E1 797 aa20.87■□□□□ 0.93
CHD3-204ENST00000439235 C5orf42Q9H799 3197 aa20.86■□□□□ 0.93
CHD3-204ENST00000439235 E7ESA3 106 aa20.86■□□□□ 0.93
CHD3-204ENST00000439235 RNASEH1O60930 286 aaKnown RBP20.86■□□□□ 0.93
CHD3-204ENST00000439235 CHRNB1P11230 501 aa20.86■□□□□ 0.93
CHD3-204ENST00000439235 ALADP13716 330 aa20.86■□□□□ 0.93
CHD3-204ENST00000439235 TARSP26639 723 aaKnown RBP20.86■□□□□ 0.93
CHD3-204ENST00000439235 CHRNA4P43681 627 aa20.86■□□□□ 0.93
CHD3-204ENST00000439235 GRIA4P48058 902 aa20.86■□□□□ 0.93
CHD3-204ENST00000439235 SESN2P58004 480 aaPredicted RBP20.86■□□□□ 0.93
CHD3-204ENST00000439235 PDIA2Q13087 525 aaKnown RBP20.86■□□□□ 0.93
CHD3-204ENST00000439235 CBLBQ13191 982 aa20.86■□□□□ 0.93
CHD3-204ENST00000439235 GALNT3Q14435 633 aa20.86■□□□□ 0.93
CHD3-204ENST00000439235 SLMAPQ14BN4 828 aa20.86■□□□□ 0.93
CHD3-204ENST00000439235 UBXN2BQ14CS0 331 aa20.86■□□□□ 0.93
CHD3-204ENST00000439235 ARSIQ5FYB1 569 aa20.86■□□□□ 0.93
CHD3-204ENST00000439235 SIRPB2Q5JXA9 342 aa20.86■□□□□ 0.93
CHD3-204ENST00000439235 FNBP1LQ5T0N5 605 aa20.86■□□□□ 0.93
CHD3-204ENST00000439235 DENND5AQ6IQ26 1287 aa20.86■□□□□ 0.93
CHD3-204ENST00000439235 BRAT1Q6PJG6 821 aa20.86■□□□□ 0.93
CHD3-204ENST00000439235 NDUFAF2Q8N183 169 aa20.86■□□□□ 0.93
CHD3-204ENST00000439235 RPLP0P6Q8NHW5 317 aa20.86■□□□□ 0.93
CHD3-204ENST00000439235 AENQ8WTP8 325 aaKnown RBP20.86■□□□□ 0.93
CHD3-204ENST00000439235 RMDN1Q96DB5 314 aa20.86■□□□□ 0.93
CHD3-204ENST00000439235 ECHDC3Q96DC8 303 aa20.86■□□□□ 0.93
CHD3-204ENST00000439235 PPP1R16AQ96I34 528 aa20.86■□□□□ 0.93
CHD3-204ENST00000439235 PWWP2AQ96N64 755 aa20.86■□□□□ 0.93
CHD3-204ENST00000439235 SAYSD1Q9NPB0 183 aa20.86■□□□□ 0.93
CHD3-204ENST00000439235 PRLP01236 227 aa20.85■□□□□ 0.93
CHD3-204ENST00000439235 CTSLP07711 333 aa20.85■□□□□ 0.93
CHD3-204ENST00000439235 FAM153BP0C7A2 387 aa20.85■□□□□ 0.93
CHD3-204ENST00000439235 NFKBIAP25963 317 aa20.85■□□□□ 0.93
CHD3-204ENST00000439235 DHX9Q08211 1270 aaKnown RBP20.85■□□□□ 0.93
CHD3-204ENST00000439235 FAM153CQ494X1 144 aa20.85■□□□□ 0.93
CHD3-204ENST00000439235 ZNF805Q5CZA5 627 aa20.85■□□□□ 0.93
CHD3-204ENST00000439235 FAM46CQ5VWP2 391 aa20.85■□□□□ 0.93
CHD3-204ENST00000439235 ARMC3Q5W041 872 aa20.85■□□□□ 0.93
CHD3-204ENST00000439235 OR2T3Q8NH03 318 aa20.85■□□□□ 0.93
CHD3-204ENST00000439235 HCAR2Q8TDS4 363 aa20.85■□□□□ 0.93
CHD3-204ENST00000439235 SPOCK2Q92563 424 aa20.85■□□□□ 0.93
CHD3-204ENST00000439235 VOPP1Q96AW1 172 aa20.85■□□□□ 0.93
CHD3-204ENST00000439235 KLHL32Q96NJ5 620 aa20.85■□□□□ 0.93
CHD3-204ENST00000439235 IL22Q9GZX6 179 aa20.85■□□□□ 0.93
CHD3-204ENST00000439235 TBC1D17Q9HA65 648 aa20.85■□□□□ 0.93
CHD3-204ENST00000439235 CD320Q9NPF0 282 aa20.85■□□□□ 0.93
CHD3-204ENST00000439235 DKK3Q9UBP4 350 aa20.85■□□□□ 0.93
CHD3-204ENST00000439235 MMP17Q9ULZ9 603 aa20.85■□□□□ 0.93
CHD3-204ENST00000439235 MYO10Q9HD67 2058 aa20.84■□□□□ 0.93
CHD3-204ENST00000439235 TSPAN11A1L157 253 aa20.84■□□□□ 0.93
CHD3-204ENST00000439235 SDR42E2A6NKP2 422 aa20.84■□□□□ 0.93
CHD3-204ENST00000439235 AVILO75366 819 aa20.84■□□□□ 0.93
CHD3-204ENST00000439235 PDHA1P08559 390 aa20.84■□□□□ 0.93
CHD3-204ENST00000439235 MGAT1P26572 445 aa20.84■□□□□ 0.93
CHD3-204ENST00000439235 POLR2LP62875 67 aaKnown RBP20.84■□□□□ 0.93
CHD3-204ENST00000439235 ZXDAP98168 799 aa20.84■□□□□ 0.93
CHD3-204ENST00000439235 MTM1Q13496 603 aa20.84■□□□□ 0.93
CHD3-204ENST00000439235 ZNF776Q68DI1 518 aaPredicted RBP20.84■□□□□ 0.93
CHD3-204ENST00000439235 RELL1Q8IUW5 271 aa20.84■□□□□ 0.93
CHD3-204ENST00000439235 ZNF687Q8N1G0 1237 aa20.84■□□□□ 0.93
CHD3-204ENST00000439235 PIP4K2CQ8TBX8 421 aa20.84■□□□□ 0.93
CHD3-204ENST00000439235 CAVIN3Q969G5 261 aa20.84■□□□□ 0.93
CHD3-204ENST00000439235 SRPK1Q96SB4 655 aaKnown RBP20.84■□□□□ 0.93
CHD3-204ENST00000439235 FAM129BQ96TA1 746 aa20.84■□□□□ 0.93
CHD3-204ENST00000439235 RSPH9Q9H1X1 276 aaPredicted RBP20.84■□□□□ 0.93
CHD3-204ENST00000439235 LMAN1LQ9HAT1 526 aa20.84■□□□□ 0.93
CHD3-204ENST00000439235 PIH1D1Q9NWS0 290 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms